Detailed information of amic_s0142.g30.t1 in Acropora microphthalma

Genomic Location: sc0000142_pilon:665098...676476
NR annotation: XP_029211499.2, CCR4-NOT transcription complex subunit 10-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4IFB6CCR4-NOT transcription complex subunit 10 OS=Bos taurus OX=9913 GN=CNOT10 PE=2 SV=1
Q9H9A5CCR4-NOT transcription complex subunit 10 OS=Homo sapiens OX=9606 GN=CNOT10 PE=1 SV=1
Q4R350CCR4-NOT transcription complex subunit 10 OS=Macaca fascicularis OX=9541 GN=CNOT10 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005678 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for amic_s0142.g30.t1 in Acropora microphthalma.
 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR039740
all species →		FamilyCCR4-NOT transcription complex subunit 10Interproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12979
all species →		CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006402
all species →		Biological ProcessmRNA catabolic processInterproscan
GO:0017148
all species →		Biological Processnegative regulation of translationInterproscan
GO:0030014
all species →		Cellular ComponentCCR4-NOT complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0142.g30.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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