Gene detail

Detailed information of amic_s0144.g37.t1 in Acropora microphthalma

Genomic Location: sc0000144_pilon:653263...684501
NR annotation: XP_029210992.1, apoptosis inhibitor 5-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0144.g37.t1

CCGCTGTCATGCGCATGAAAGTGAGGTCAAGGGAGTCAAGCGTGGTTTCCAAGCTGTAAGAAAAGAGAAATCTGTTAGGACCGCAGTACTTCTCAAAATACTGAGATATTCCTCTTTCTGCCTCTTTTTGGCAACATGTCCGGTGTCGAAGAACTGTACAAACAGTTTGGAATCCTTGCAGATGCAAAGGAAAAGGCGGGAGAGCACGAAGGTGCCTTTTTGGCCATTTTGGCCGCGGTGAAGGGCTCACAAGCAGAAAAAAGGCTCGCTTCTCAATTTATCGCAAGATTTTTCAAGTATTTTCCAAAATTACAAGAAAATGCTATTGATGCAATGCTGGATTTATGCGAGGATGAGGACAATATGATCAGACGACAAGCAATAAAAGGCTTACCAGATCTCTGCAAAGACACACCAGAACATTTGCCAAGAATTGCTGATGTATTAACTCAACTCTTGCAATCAGAGGATCCTACTGAGTTAACAATTGTCAAGAATGCCCTCACCTCCCTGTTTAAAATGGAACCAAAAGGAACAATTGGTGGCCTGTTTTCACAAATCCTGAACGGAGAAGAAGTGTCAAGAGAAAGTGCAATCAACTTTTTGAGCAGTGTTGTGGAGGAATATGGCAAAGCGGTGTTGCACCCCTCTCAGGAAACAGAGGAGTTCCTTGTTGAGGAGATAAAAAAGGCTATGGCAGATGTCACTGGAGAAGAGTTCCGCACATTCATGAAGATCTTGTCTTCACTGAAAGTAATGGCCAATGCTCACCAAGAACTTGCCGGCATTGTGGCAGAACAAGTAGAACTAACACAAGCTTTCCAGCCTACTGATGCTGATGTGGTGGACAGATTCCTTTCATGTGCAAGGCAGGCCCTTCCTTATTTTGTGAAAGGAGCATCAGCGCAGGCATTTTTTTCATACATAGTGGAGAGTATCCTTCCAAAGCTAAATGAATTAGTCTCCTCAGATGGCGATGACATCAAGCTGGAGATGCTTAAATTGTGCGCAGAAATGTCCCCACATGGTTTGACAGAGGAGAATGTAAAGGCCTCTATAGAACCCATCTACAATTTGCTACTGGAATACATGCCTTTGCCTCCAGGGGAAGAAGAGGAGAATAAAACAGAAGAAAATGCTGAACCAAAGCTTCAATTTTCCTGCGTTGAATGCCTCATTTTCACATTTCACCAGCTAGCTAAAAAGAGTCCAGGATTTTTAACAGATGCAAGTGCCGCTGATCGTTTAAAGGATTTCCGTCTAAGGCTTCAGTACTTTGCTCAAGGCTGTCAGGTTTACATAAAACAATTGAGACTATCGCTACAAGGGAAAACCGGTGTTGCCCTTCAAGAGGATGAGAATAAAATAAAAATTGTAGCCCTTAGGACAACTTCAAATATCAATGCATTGATAAAGGACCTATTTCATAATCCACCCTCATTTAAGAGCACTGTGACGCTATCGTGGAAAACCCCGGCAAAGAATCAGCCAACTACACCAGTAGCCAAAAAAGAGAATACAAACACAGTTGATGAAAAACGAAAACGAGCAGGGATCACTCCGATCACCTTTGACCTGCCTCCCGAGACAAAGTCACCTAAAAAATCCAGAGGCAGCACAGTCACCGTTTATACGCCGCCTGGAAGGCGTATGGGAGCGTCGAACGGTGTTCTCAAAGGTCAGAGCATGCCCAATGGAAACCGCGGCCGCGGAGGATTCCGCGGACGAAACCGTGGTCGAGGAAGGGGCTGGAGAGGAGGACGATTTTAGATGCCTTAACATTTGTAAATTGGTTCGTTTATGTTCTTCAACTGTGGAAAAGTTTTATTGAACGTTTGTTCGAACGATGTACGACAATCTGACTCTCCCATCCCTTCTAAAGTTTGTTTATACAGTACGCCTATTACCATGGCACCTGAAGCTACGTGTTGAAGTCTTTTTTATTGTAAATGTTTGGATTCAATGAAGGCTTATATCTTAAAGCTCAAGTACTCCTTCAAAGAGCAGCTGACAGAGCACTTTTTTAGTTTTTATTAGTTGTCTTGTCTTGCTTTCGTACCAAGCGTTTTCTAAGTGGGGTTAGATTAGGCACAGTTTCTGTAGACGAGGCTTCTTCCTCTTCCTCTTTTAGACAAAATTGGCTCCCCTTAACGTCCAAGCCATGTATTAACTTAACATAAGTTCGTTATACTGGCTCTAACGTTATTATCCGATGATTAAATGTCTTTTTTCCTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DDM4	Apoptosis inhibitor 5-A OS=Xenopus laevis OX=8355 GN=api5-a PE=2 SV=1
O35841	Apoptosis inhibitor 5 OS=Mus musculus OX=10090 GN=Api5 PE=1 SV=2
Q9BZZ5	Apoptosis inhibitor 5 OS=Homo sapiens OX=9606 GN=API5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006164 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05918 all species →	API5	Apoptosis inhibitory protein 5 (API5)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008383 all species →	Family	Apoptosis inhibitory 5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12758 all species →	APOPTOSIS INHIBITOR 5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0144.g37.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.