Detailed information of amic_s0144.g52.t1 in Acropora microphthalma

Genomic Location: sc0000144_pilon:854424...883292
NR annotation: XP_015753029.1, PREDICTED: uncharacterized protein LOC107332798 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001560 (this species only)
Transcription factor familyNrf1 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF10491
all species →		Nrf1_DNA-bindNLS-binding and DNA-binding and dimerisation domains of Nrf1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR019525
all species →		DomainNuclear respiratory factor 1, NLS/DNA-binding, dimerisation domainInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0144.g52.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for amic_s0144.g52.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0144.g52.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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