Gene detail

Detailed information of amic_s0145.g49.t1 in Acropora microphthalma

Genomic Location: sc0000145_pilon:540314...560096
NR annotation: XP_044178927.1, allatostatin-A receptor-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0145.g49.t1

ATGTGGCACGATTCTTTTAACAATGGCGAACCATCGCAGCTTCCCCAATTCGGCGACACATCCTTTCAGAGGTTTGGAGGCCTCAGCGAAAATCTTTCACAAGATGACTTTGATCCATTTAAGGAGCAGAACATTCAGGGAATAGGAGACAACAGTGCCCCTCGCTTTCAAGCTAAGGCATGGTATGATATGGGCTCTCTGTTTACGGAGGAACTTCCAGAATCTTCCAACGAAACAGGTAGTCACGTGCTAACAGGTGGAGGAAATGCACAGTCACCCCAGGGAAATTCAACATCAACCTGGCTGACAAGCCAAACTGTGAGCTGCCAAGATGATTCTCAGAGGAAGAGTGCTGTTCTTAATAAAATACACCACCTTAAATCAATAAGTTTCGCACTGGATGAGGAAATCGAAGAACAAAAACATCGAAATATCATACTTGAGAAACAGATAGCTGATGGCGACGAACACCTTACACAAGTGAATGAACAAGCCATGGGCTTGAAGAGTGAATTACAAGAAATGACGGAAAAGCACAGAAAATTCGAAAACACGCTTGACTGCAGAATTCAGCAGCTGACGGCAGTCATTGAGACCAAAAGACGAAATATCTACCAAATTAAGCACGACGCGAACATGGTAGAAACACTGAGAGAAGATAAGAACAAGGTGAGAGTTGAGATAAAGAAGCTGGAAGAACAACTTGAAGATATCAACTTGGATATTTATTGGATGGATTACAGATTTATGCACGACTTAGACAGGATGGTAATATTTCCCTTTTGGAAATTAGAGGAGGATTTGGAAAGAGCTCTGAACGGAGAGGATCCAACGCTTTATGATGAACCAGGACCACCCGACAGCgaggacgatgagggggatgggtatgattatgacgaggatgaagttgatgattatgaagaagaAGCAAGTACAGAAGACAAGGAAACATATAAGTCTTCAGAAAGAACCTCTGATTGCACAAATAGCCTCCGATCATCAAATGCTACCGCGAGTGAGAGCTGTCATTCGACAGAGAAAAACAAAGAAGTGAAGAGTGGAAGTAAATTTGGCAAGTTCCTTGCAAATGTGTTTCATGACAGGAGTGCAGGGAAAATGAACCAACAGAAGAAGGGTCATCCATCGCGAGCAAAGGTTTTGTTGGAGCTGGGTGACAATGACACATCGTACAAGCTGAATTCAGAGGTCCTAGAGGATATCAAGAAGCTTCAGGCACCAATCCAAGTCATCTCAGCCGTTGGAAAGGCAAGGGTTGGAAAGTCTACGATGCTTAATTTAATCACCCACATCTTGGATGAGAAGAATCATGACTTGGTCGAAGAGACTTTTGCAACGGGAGACTCGGTCGATGCTGTGACAAGAAATGTATGGGTGCATATTGTACCGAAACATGGAGGTGTTGATGAAAGAGGAAGCATTTTGTTCATGGACGTGGAGGGAACCGATCTTGGTGACGATGGAGTAACAGGTCATCTCAGCATGTTTACTGCCATGATGTCGTCCTTGCTTAACGTTTTCGCCAGAGACTACGTCGGAAATCACGATAAATTATTCCTATATAGAATAACTCGCTTGAGTGAACTCGTGTTTCAAAACCAAAGTGACCCTCAAAACTTCCCTAAACTTCACATTATCGCCCGAACTGACTTACAGCCTCGTGATCAAAACGGAGACTACATTCGCGATGAGATTTACAAGTTCGCGGACGGAAAGATCAAGAAGTATTTTCAACAACGTCAAATTGAAGTTAGCCACATAAAAAGTGTCCCGAACGCTTCTTTGTTGGGAGATATCGGGCTGCTGAACAGCTCATCCCACTGGAAATCGTTGAATACGGTAGCGGACATATTCAGAAATTCGCCCGAAAAAAAATCTTTGCAAGGAAATCTTGTAAATGGCGAGGCATTGAAAGATCTAGCTGAAAAACTCGTAGAGCAAATGAATAAAAATGAGTGGGAAAGTTTTGGAGATATATATCTTTCCTGGGAAAAAGACATCTGCCGAAAGAGTTATGAGAATCTCGTAAAACCCCTCCTGAATTTGACATCAGATCAAATATTGGAATCGATGTTGAAAACCATGGAGAAATTTAAAGGGAAATGTACCTTTGATTCGGAGATACGGGCTGCTCAGGCGGGCCTAAATGAGGCAATGAAGGCAGCAAAGACACGAGAAGAGGAAAAAGAAAGAAACGGATGGTTTACTTATGAGAATTTGAAGATAGCTGGTGTTTTTGTTGGCAGTCACATTCTGTCACATTTTCTCAGTGATGAACAGCTTAAAACGAACGTCACGACTATAGCTTATTCTCCCTACAACGTGATTGGTCTCAATGGCGTCTGCTGGAAATGGAATGAAGATGCAGAGAAGAAGTTTGGCCTGACTGGGGAGGAGTGCGGAGTGATTGCTCAAGAGGTTGAGAGCCTGTATCCATGGGCTGTGGTGAGAAGTAAAGACGCAAGAGGCTACCTGAAAGGTTCTGCATCACCATTTGTAATTAAGCTGTTTCCCAGTGTAGAATGCACGAAAGGCTACGCTCCAGGCGGAGGAGTTCCCATTATTGAATCTATCACTGCATCGGTGGCCAAGGCTCAGAAAATTTCTATTGCTTTCCTGGCAGAAAAATTGTCCCTGGGTTCTGCTTTGGCAAAAGAACTTGTTAACGACTCCAAAACATTCTACAACCTCTATGAAGACATTGCACCAAAGCTGGTCTCTGGTCTTGGAATATTTTCTGCTTCTATGGGGGTACTTGGTTCACTAACTAAACCCACTCCACAAGACTTGTTGAACATTGTCAACAAAGCCTTCAAAAAGCTGACAGATGATATAAATGATCGAATGAACAAGATGCAAGGATACGTGGATGGCCGAGTTATTCAACAAGAGACGCGCAGAATTAACAGTCAGCTCCAAGGCCTCAAACGCCACTGGACAAACTGTATCGAGCAAAGCAGTCGAAAGAATTCCATCAGTTGTCAGCGGTCGTCTATTCGAGACATACACGCTGACCTGCCTCATTTTATGATACTGGACGAATATTTCAACGGAGGTAAGAAAGGAAAACAACTCGCATACTTTGATGTGCATCGTCTTGAGGCAGTGCTTATTCCATTCAGGGATTTTGCATCCTATCATATTTACTCATTGCAGATGCTGGTGAACGAGTTGAACGATTTCAGAGATACAGACAGTCTCTTTTACAGGAAGAAATACTTGCAACAAATCGTCGATCACGGAAAGGTCTACTACGACTACGCACACTGGGCCTATGAAACCATTTTTAAGAGGGTGAGCATGGGAGACAAAAATGCAACATGGACAGTAAATTCTTCACAAGCAAACAACTCATCACAAACGGCGAATTCTCCTTATCACGGCAAAAACTCCATCTACGTTTTCACACCAGCTGGCAATTCTGAGAAACTTACTCTTTGCTTGATTGTGTCAACCCTGGGAATTACCGGATTTCTTGGAAACTGCAGCATATTTTATTTTCTTAGCAAAATCAAGAAGAGAAATGGAACTCAATCAAATCCCTTTGTGAGAAGTCTGAACTTGTATATTAGAAGTTTGTCTCTGTCAGACTTACTGATGTGTGCAGTGGGAGCTCCTCTGCTTTGTATTAACGTCTCGTCAGACGTTTTCCAAAGTGGTTGGCCGTGCAAGATAGTAAGATATTTACAATTTGTATTTCCTGCCGCGACTATCAACACTTTAGTTGTAACAAGTCTGGAAAAGTTCTTATCTACTCGCAACGTCTTACAGCGGCCCATGAGTACGAGAAAGGTACGAAATATAATTTTGTATGCTTGGTTATTGGGACTTCTTCTCATGATGCCTGCTTCAGCTGCATACGATGGAATAAGAGTGGACCTCAATGACAGCCATTTCACTGTTATTTGCAAAAACAACGAAAATTTCTATCCATTTCGACTAACACTTATCGTTTTACCGATACAATATGTTTTTCCAACCGTATTTGTGTTTTTTGTAAACATACATTTGTCGATCACTTTGTGGAATTCTATTAAAAGGCAAAGCGTCGCCATTGCTGTAAAGAATTCCTTCAAGGCTCAATTACGAGCTAAGAGAATCAAAGGCACAACTCTGCTCGTCGCGCTAACCTTCGGTTTCATTACTCCTTTCTCTTTCTTTCTTGGTAACATGGTGTACACGCAGTTTGTTAAACCGCGTCGCGACTTTAGAACATCTTACATGTTTCGCTACGGCTCTGGCATCCTCGTATTTCTAAGCCCAGTGATCAACTTTACAATCTTTTTTTCTCAGATGAATGACTTTCGTCAATTTCTCAAGAAAACTTTAAAAATCCAACGAAGTGGAAAGTAA

Transcript

amic_s0145.g49.t1

GAGAGGAATAATTTGTTGATTTGAGCAATACCCTCGAAAAGGAAACAAAAAGGCTGCCGCTAGGTAACTTAATTCTTTAACAAGTCCCGTCTCTCTTCATCTAGTTATGTGGCACGATTCTTTTAACAATGGCGAACCATCGCAGCTTCCCCAATTCGGCGACACATCCTTTCAGAGGTTTGGAGGCCTCAGCGAAAATCTTTCACAAGATGACTTTGATCCATTTAAGGAGCAGAACATTCAGGGAATAGGAGACAACAGTGCCCCTCGCTTTCAAGCTAAGGCATGGTATGATATGGGCTCTCTGTTTACGGAGGAACTTCCAGAATCTTCCAACGAAACAGGTAGTCACGTGCTAACAGGTGGAGGAAATGCACAGTCACCCCAGGGAAATTCAACATCAACCTGGCTGACAAGCCAAACTGTGAGCTGCCAAGATGATTCTCAGAGGAAGAGTGCTGTTCTTAATAAAATACACCACCTTAAATCAATAAGTTTCGCACTGGATGAGGAAATCGAAGAACAAAAACATCGAAATATCATACTTGAGAAACAGATAGCTGATGGCGACGAACACCTTACACAAGTGAATGAACAAGCCATGGGCTTGAAGAGTGAATTACAAGAAATGACGGAAAAGCACAGAAAATTCGAAAACACGCTTGACTGCAGAATTCAGCAGCTGACGGCAGTCATTGAGACCAAAAGACGAAATATCTACCAAATTAAGCACGACGCGAACATGGTAGAAACACTGAGAGAAGATAAGAACAAGGTGAGAGTTGAGATAAAGAAGCTGGAAGAACAACTTGAAGATATCAACTTGGATATTTATTGGATGGATTACAGATTTATGCACGACTTAGACAGGATGGTAATATTTCCCTTTTGGAAATTAGAGGAGGATTTGGAAAGAGCTCTGAACGGAGAGGATCCAACGCTTTATGATGAACCAGGACCACCCGACAGCgaggacgatgagggggatgggtatgattatgacgaggatgaagttgatgattatgaagaagaAGCAAGTACAGAAGACAAGGAAACATATAAGTCTTCAGAAAGAACCTCTGATTGCACAAATAGCCTCCGATCATCAAATGCTACCGCGAGTGAGAGCTGTCATTCGACAGAGAAAAACAAAGAAGTGAAGAGTGGAAGTAAATTTGGCAAGTTCCTTGCAAATGTGTTTCATGACAGGAGTGCAGGGAAAATGAACCAACAGAAGAAGGGTCATCCATCGCGAGCAAAGGTTTTGTTGGAGCTGGGTGACAATGACACATCGTACAAGCTGAATTCAGAGGTCCTAGAGGATATCAAGAAGCTTCAGGCACCAATCCAAGTCATCTCAGCCGTTGGAAAGGCAAGGGTTGGAAAGTCTACGATGCTTAATTTAATCACCCACATCTTGGATGAGAAGAATCATGACTTGGTCGAAGAGACTTTTGCAACGGGAGACTCGGTCGATGCTGTGACAAGAAATGTATGGGTGCATATTGTACCGAAACATGGAGGTGTTGATGAAAGAGGAAGCATTTTGTTCATGGACGTGGAGGGAACCGATCTTGGTGACGATGGAGTAACAGGTCATCTCAGCATGTTTACTGCCATGATGTCGTCCTTGCTTAACGTTTTCGCCAGAGACTACGTCGGAAATCACGATAAATTATTCCTATATAGAATAACTCGCTTGAGTGAACTCGTGTTTCAAAACCAAAGTGACCCTCAAAACTTCCCTAAACTTCACATTATCGCCCGAACTGACTTACAGCCTCGTGATCAAAACGGAGACTACATTCGCGATGAGATTTACAAGTTCGCGGACGGAAAGATCAAGAAGTATTTTCAACAACGTCAAATTGAAGTTAGCCACATAAAAAGTGTCCCGAACGCTTCTTTGTTGGGAGATATCGGGCTGCTGAACAGCTCATCCCACTGGAAATCGTTGAATACGGTAGCGGACATATTCAGAAATTCGCCCGAAAAAAAATCTTTGCAAGGAAATCTTGTAAATGGCGAGGCATTGAAAGATCTAGCTGAAAAACTCGTAGAGCAAATGAATAAAAATGAGTGGGAAAGTTTTGGAGATATATATCTTTCCTGGGAAAAAGACATCTGCCGAAAGAGTTATGAGAATCTCGTAAAACCCCTCCTGAATTTGACATCAGATCAAATATTGGAATCGATGTTGAAAACCATGGAGAAATTTAAAGGGAAATGTACCTTTGATTCGGAGATACGGGCTGCTCAGGCGGGCCTAAATGAGGCAATGAAGGCAGCAAAGACACGAGAAGAGGAAAAAGAAAGAAACGGATGGTTTACTTATGAGAATTTGAAGATAGCTGGTGTTTTTGTTGGCAGTCACATTCTGTCACATTTTCTCAGTGATGAACAGCTTAAAACGAACGTCACGACTATAGCTTATTCTCCCTACAACGTGATTGGTCTCAATGGCGTCTGCTGGAAATGGAATGAAGATGCAGAGAAGAAGTTTGGCCTGACTGGGGAGGAGTGCGGAGTGATTGCTCAAGAGGTTGAGAGCCTGTATCCATGGGCTGTGGTGAGAAGTAAAGACGCAAGAGGCTACCTGAAAGGTTCTGCATCACCATTTGTAATTAAGCTGTTTCCCAGTGTAGAATGCACGAAAGGCTACGCTCCAGGCGGAGGAGTTCCCATTATTGAATCTATCACTGCATCGGTGGCCAAGGCTCAGAAAATTTCTATTGCTTTCCTGGCAGAAAAATTGTCCCTGGGTTCTGCTTTGGCAAAAGAACTTGTTAACGACTCCAAAACATTCTACAACCTCTATGAAGACATTGCACCAAAGCTGGTCTCTGGTCTTGGAATATTTTCTGCTTCTATGGGGGTACTTGGTTCACTAACTAAACCCACTCCACAAGACTTGTTGAACATTGTCAACAAAGCCTTCAAAAAGCTGACAGATGATATAAATGATCGAATGAACAAGATGCAAGGATACGTGGATGGCCGAGTTATTCAACAAGAGACGCGCAGAATTAACAGTCAGCTCCAAGGCCTCAAACGCCACTGGACAAACTGTATCGAGCAAAGCAGTCGAAAGAATTCCATCAGTTGTCAGCGGTCGTCTATTCGAGACATACACGCTGACCTGCCTCATTTTATGATACTGGACGAATATTTCAACGGAGGTAAGAAAGGAAAACAACTCGCATACTTTGATGTGCATCGTCTTGAGGCAGTGCTTATTCCATTCAGGGATTTTGCATCCTATCATATTTACTCATTGCAGATGCTGGTGAACGAGTTGAACGATTTCAGAGATACAGACAGTCTCTTTTACAGGAAGAAATACTTGCAACAAATCGTCGATCACGGAAAGGTCTACTACGACTACGCACACTGGGCCTATGAAACCATTTTTAAGAGGGTGAGCATGGGAGACAAAAATGCAACATGGACAGTAAATTCTTCACAAGCAAACAACTCATCACAAACGGCGAATTCTCCTTATCACGGCAAAAACTCCATCTACGTTTTCACACCAGCTGGCAATTCTGAGAAACTTACTCTTTGCTTGATTGTGTCAACCCTGGGAATTACCGGATTTCTTGGAAACTGCAGCATATTTTATTTTCTTAGCAAAATCAAGAAGAGAAATGGAACTCAATCAAATCCCTTTGTGAGAAGTCTGAACTTGTATATTAGAAGTTTGTCTCTGTCAGACTTACTGATGTGTGCAGTGGGAGCTCCTCTGCTTTGTATTAACGTCTCGTCAGACGTTTTCCAAAGTGGTTGGCCGTGCAAGATAGTAAGATATTTACAATTTGTATTTCCTGCCGCGACTATCAACACTTTAGTTGTAACAAGTCTGGAAAAGTTCTTATCTACTCGCAACGTCTTACAGCGGCCCATGAGTACGAGAAAGGTACGAAATATAATTTTGTATGCTTGGTTATTGGGACTTCTTCTCATGATGCCTGCTTCAGCTGCATACGATGGAATAAGAGTGGACCTCAATGACAGCCATTTCACTGTTATTTGCAAAAACAACGAAAATTTCTATCCATTTCGACTAACACTTATCGTTTTACCGATACAATATGTTTTTCCAACCGTATTTGTGTTTTTTGTAAACATACATTTGTCGATCACTTTGTGGAATTCTATTAAAAGGCAAAGCGTCGCCATTGCTGTAAAGAATTCCTTCAAGGCTCAATTACGAGCTAAGAGAATCAAAGGCACAACTCTGCTCGTCGCGCTAACCTTCGGTTTCATTACTCCTTTCTCTTTCTTTCTTGGTAACATGGTGTACACGCAGTTTGTTAAACCGCGTCGCGACTTTAGAACATCTTACATGTTTCGCTACGGCTCTGGCATCCTCGTATTTCTAAGCCCAGTGATCAACTTTACAATCTTTTTTTCTCAGATGAATGACTTTCGTCAATTTCTCAAGAAAACTTTAAAAATCCAACGAAGTGGAAAGTAAATTTGTTTTATAAGTTAGTTTCATGAACTTTAAGTCTGTTTGTTAGATTTACAATGTTTTTGCGTAATTCTTTCGAGGTCGGATATTTTTCTGGCTCGAACGATCAATAACTGAAGTATATTGGT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000908 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13884 all species →	Peptidase_S74	Chaperone of endosialidase	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF02263 all species →	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030392 all species →	Domain	Intramolecular chaperone auto-processing domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR015894 all species →	Domain	Guanylate-binding protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24241 all species →	NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0145.g49.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.