Detailed information of amic_s0148.g96.t1 in Acropora microphthalma

Genomic Location: sc0000148_pilon:1746888...1756218
NR annotation: XP_029199952.2, ribosomal RNA-processing protein 7 homolog A-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y3A4Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE=1 SV=2
Q5RA17Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE=2 SV=1
Q9D1C9Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006364 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12923
all species →		RRP7Ribosomal RNA-processing protein 7 (RRP7) C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024326
all species →		DomainRibosomal RNA-processing protein 7, C-terminal domainInterproscan
IPR040446
all species →		FamilyRibosomal RNA-processing protein 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13191
all species →		RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000028
all species →		Biological Processribosomal small subunit assemblyInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0032545
all species →		Cellular ComponentCURI complexInterproscan
GO:0034456
all species →		Cellular ComponentUTP-C complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0148.g96.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP