Detailed information of amic_s0149.g34.t1 in Acropora microphthalma

Genomic Location: sc0000149_pilon:462622...471045
NR annotation: XP_029186102.2, nuclear receptor subfamily 2 group F member 1-B-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PH18Nuclear receptor subfamily 2 group F member 1-B OS=Danio rerio OX=7955 GN=nr2f1b PE=2 SV=1
Q90733COUP transcription factor 2 OS=Gallus gallus OX=9031 GN=NR2F2 PE=2 SV=1
Q9TTR7COUP transcription factor 2 OS=Bos taurus OX=9913 GN=NR2F2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000308 (this species only)
Transcription factor familyESR-like · all TF in this species
Transcription factor familyMiscellaneous · all TF in this species
Transcription factor familyNGFIB-like · all TF in this species
Transcription factor familyRXR-like · all TF in this species
Transcription factor familySF-like · all TF in this species
Transcription factor familyTHR-like · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104
all species →		Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001723
all species →		FamilyNuclear hormone receptorInterproscan
IPR035500
all species →		Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536
all species →		DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR050274
all species →		FamilyNuclear hormone receptor family NR2 subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24083
all species →		NUCLEAR HORMONE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879
all species →		Molecular Functionnuclear receptor activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154
all species →		Biological Processcell differentiationInterproscan
GO:0048856
all species →		Biological Processanatomical structure developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0149.g34.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP