Gene detail

Detailed information of amic_s0154.g26.t2 in Acropora microphthalma

Genomic Location: sc0000154_pilon:377516...383470
NR annotation: XP_029191390.2, beta-sarcoglycan-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006366 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04790 all species →	Sarcoglycan_1	Sarcoglycan complex subunit protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006875 all species →	Family	Sarcoglycan complex subunit protein	Interproscan
IPR027659 all species →	Family	Beta-sarcoglycan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21142 all species →	SARCOGLYCANS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016012 all species →	Cellular Component	sarcoglycan complex	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007517 all species →	Biological Process	muscle organ development	Interproscan
GO:0042383 all species →	Cellular Component	sarcolemma	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12566	SGCB; beta-sarcoglycan	-	Viral myocarditis	ko05416	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.