Gene detail

Detailed information of amic_s0155.g7.t1 in Acropora microphthalma

Genomic Location: sc0000155_pilon:153274...163385
NR annotation: XP_029201321.1, cyclin-dependent kinase 6-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0155.g7.t1

CAGATTTATTTTGAAGATTTGTGACTTTCTTCATTCATTCGAGGCTTAGGTCGTGCTACCGACCAGAAAGAAAGTAAAATCGGATCGATGAGTACTGAGCCAGCAGGAGGTCACCTGTACTCCTAAATCATCAAGAATTTGGCTTTTTCTGGTTCTGCCTGACACGAACGTCTCCTTCAAGTGAAACCGTGCTATTCATAGTTTGTTCGAGACCACAGCGGAATCAAAGTTGAATATTTACTTTCTCTGTATGAAGCAGTATTAAATCTGTTATCGTGTTCAGCGGATCGTACTGTTGCTTTCTTCAGCCCAAAGGCATCTCACTGACACGGAGAACCTTGATGGAATACTGAAGCGCCCTGGAAGATTCGACACAAGTGTGTGGGCACATTTAACACGGCAGAGAGTTTTTTGGTGAAGCAAGATCTTCGCCATGTCACGCTAAGATGAGCAAGGCTCTGAGAGGAAGAAAGTGAAATTCGGCTTTCGGATCTTGTCGATGTAAGAACCGTGATGGCCAAAAAATACGAAGAAGTGGCAGAGATCGGTAATGGTGCGTACGGTATTGTCTACAAAGCCCGGGATCTTCAAAACGAAGGACGATTCGTGGCACTCAAGAGAGTTAGAATTGTAAACAGCGAAGAAGGAATGCCACTCTCTACAATCCGTGAAATCGCCCTTCTCAAACAGATCGGTAACTTCGCCCACAAAAACATTGTCAGATTACTGGATGTGTTCCACACAACTTCCCCATCAAAGATGGAAACCAACTTGTCACTAGTTTTCGAACACATTGAACAGGACCTTAATGCATACATTGAGAACTGTCCCCAACCTGGTCTGCCAGAATGGAAAGCAAAGGACATCACCCATCAGCTGTTAAATGGTGTGGATTTTCTGCACTCTAATCGGATCGTCCACAGAGATCTGAAACCACAGAACATCTTGATCTCAGTAACTGGACAGGTGAAGATTGCAGACTTTGGGCTGGCAAGGGTGTACAGTAATGCAATGGCTCTGACATCAGTGGTGGTAACTCTGTGGTACAGAGCACCAGAGGTTCTACTGCAATCAAATTATGCAACACCTGTGGACATTTGGAGTATCGGTTGCATCATGGCAGAGCTTTACAATCGAAAACCACTTTTTGAGGGAAAATCAGATGTTGATCAACTTCACAAAATTTTTAGTGTTACAGGGACACCACCACAAAGCGATTGGCCAATAAATGTTTCCCTTCCCTGGTCATCTTTTCCACGCCTTCAGCAATGTTCTCTGCCAGAGGTAATTCCAGAAATAGGCAAAAGTGGAGTTAAGTTACTCAAGAAAATGCTGACATTTAATCCCCAAAAGAGGATTTGTGCCATGGTAGCCCTCCAAGATGAGTATTTTGAAGAATTCCTTGACACTGACAAGGAAAACAGCAAGGGAAGTAATCCAAACATTGCCAACCAAAGATAAAGAGCATGTGTTCCCAGAAAAGGTGTAGGGTTCGAAGCTACTGTGAAATGAGTGTTTTTAGTGTGCCTAAAAAGTAATGATAATTATTATTATTGTTCATCTCATTCCTGATTCACATTATAAGCTAAATCCCAGAAAAACACTGAAATGGTCCTCCAGCCCCCAAGAAAATGGTACTAATTTGTAAAATTCATAAGAAACAACAACATGCACAGAAATGGATAGATCCATAGAGCCAAGTTTTAGTTTGTGAAAGTCACTGCATAACTAAACAGCTTAATAGCAGAGTGAGGTGTTGGCTTGAGTGGAAAAGTCATTTTAGTGTGAATGCGGAATTGCTAAAATTCTTACATGGAGTGTTCAATTGCTACATGAATGATCAACACCAATGCTCATGTCAAAATACTGCTCAAACAAGAGAACAGTGCAATATATTTGCAATATACTGAATTTAGGTGACTTCAGGATTTTATGGGTGTGTTTCAGTACATTTTGAGAAAAAAAATACTAGGGCATCTCCTCATTCAAGGATAAAATAACAGTGATTTTTTCTTAACCTTAAAAGGAAATCCCACAGGCCAACGCAGGTGGGGTATTAATGTGTGCAACTCCATGAATGATAGCAGATCGTGATGAAATTTAATGAAAGTGTGTTCTAACGAGATTACCCAATTTGTGAGTTTTGATTTGTTCCTTTTGCCAAAataattattattagtatttaccaaatcactggatagcaatttttgcgcgttttgattggctcccgtaacttggaatatccttggatattcactgttttgcgaacggagagaaaaatggtgtgttgttttgcgaaagtttcagaagaagaaattgtggtcatcaattaaaacagcatttttttatccatctgattttcgtaaatactaaaacaactatccccctcagggtcggtgaagagcggtggatatatatacctcgacacttcgcgtctcggtatacggtatatccaccactattcacctccccttcaggggatcgttttatattaGTGTGAATTTTTGGACCCATGTAAACTGTAGGCAAAGGAGAAAATGGATGTTTTACTTCCAATAATTGACTGAAAAACATGAGGGGTTAAATAATTATTTAAAGAGGCAAGCATTGAAAATGCCAGAAATGAACAACATTCTTCAAATTATTAGGGTGGTGCACAATATGTGACATTCTCCTGGCTAATATTTTTTAAGATTAACGAATAGAGATGAGAGAAATGCATCCAAGACTGCCTCCTTGCTTCCCAACTGATCACAAAGATTAATTTAATTCAGGCTCTGTTAGTTACTATTACTATATTTTTTTAATGCAGACCTATGGTAGTGAAATAGCATAACCTCTGCAACCCTCAGATTTGAGTTCTTGGTAACTGAGGTAGACCATACTAAGGTTGAGTATGGCAAGTTACAGAAGTGAAACTTAACTAGGAAAGCCTGGTTTTTCAAACTGTTTTTCCCCAATTGAAATCTTTTGTATCAAAAGGTTCATTTTGTAACCTTATTATGGTGTGAAAAGTATAACATTTCGTTTTCAAGTTGATTTTTTTCTTTTCGTTTTGTACTGTTTGAAATGGTATGTTCTTCTGGTAGAGTAGAGTATCATACTCAGGGAAATCATCTCCCTTCAGGTTTGTCAAAGAGAAGTCTGCACTGAACCCACGTTTTACCCTTGATGAAGCCAGAAATTATGCAAGTTTCCTTCAAATTTTGACCATCCTGGAGAGACACCTTCCCTATCATGCACTCTACTTCTCAAATACTATTGTTTTTATTTATGATATTTTTAATACATTTTTTTAAATGATTTAATAAAGTTAATTTTAAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q00534	Cyclin-dependent kinase 6 OS=Homo sapiens OX=9606 GN=CDK6 PE=1 SV=1
Q64261	Cyclin-dependent kinase 6 OS=Mus musculus OX=10090 GN=Cdk6 PE=1 SV=2
P11802	Cyclin-dependent kinase 4 OS=Homo sapiens OX=9606 GN=CDK4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000516 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050108 all species →	Family	Cyclin-dependent kinase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24056 all species →	CELL DIVISION PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0000082 all species →	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0000307 all species →	Cellular Component	cyclin-dependent protein kinase holoenzyme complex	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004693 all species →	Molecular Function	cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0010033 all species →	Biological Process	obsolete response to organic substance	Interproscan
GO:0010389 all species →	Biological Process	regulation of G2/M transition of mitotic cell cycle	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0030332 all species →	Molecular Function	cyclin binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0155.g7.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.