Gene detail

Detailed information of amic_s0158.g19.t2 in Acropora microphthalma

Genomic Location: sc0000158_pilon:243766...274783
NR annotation: XP_029185185.2, MAP kinase-activating death domain protein-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0158.g19.t2

ATGGACTCTGCACATAGCAATTTACCTTCAAGACTTATCGACTATCTTGTTGTTGTTGGCGCTCGTAAACCGACTGTGGATGCTACCGAAACGCCAGAACTCTTGCGGCGATTTCCACAGAAAGACCATGAAGACTTCGTGTTGCCTGGGGACGTGGTCTTCTTTTGCCAACCAGAAGGCTGTAACACAGTGTCGAAAAAGTTCTCATTACGGGAAGCAAACTCGTTTGCTTTTACGCTGACTGAGAAAGATTCGGGTAATGTTCGATATGGGATCTGTGTTAATGTGTTTCGTCCGTGTCTGAATTTTATTCCAAAGGAACGGACAGATTACAAAGACACTAAACTGATGGTTCGGAAGAGATCTCGTTACAAACGGGATTTCTGTATGAGTTTGACGTCTTTGTGTATTATATCTCATCACCCGTTCTTTCCGACGTTCAGGGAGTGCCTGTTTTTCCTTCGCAAAATGATCGACTCGAGAACGGGTCTTACCTCGAAGTTGGACAAAAACGATAACATTGTACCGGGCATTAACAGCTGGTCTGTGTTTACATGCACTGAGGACCAGAAAACAAGCCATTTGGCAAGCGACATGGATGAGGTAGAAACGTGGATTCAACGCCTTTTGCTTGCACAAGCTCCTGTAGCTGGAAGAACCCGTGTAGAACTTCATCTGCACTCTCCGGACACTTACACACCTTTGACCTTTGCGTTGCCAGAAACGAATCGATTTCCACTCATAGATTTTCCCATCCACATCCCCTTGGAGCTGCTTGGTGTGGAAACTTGTTTGAAAGTTTTAACATGTATATTGCTCGAACACAAGGTTGTAATCCAATCTAGGGACTACAATGCCCTTACTATGAGTGTGATAGCTCTAACATCTCTGCTTTATCCCTTGGAGTATATGTTTCCTGTCATTCCATTGCTACCTACATGTATGAACAGTGCAGAACAGCTGTTACTGGCTCCAACACCATTTGTGATTGGTGTTCCTGCAAGCTTCTTTCGATACAAGTGTGATGGCTTTCAGATGCCTGGGGATGTGTGGATTGTTGACCTGGATTCAAATAAGATCACTGTTCCTCTGACGGCAGATGAATTACCCCCTCTTCCGCAACCTGAGGGAGCTATACTCACTAGGAACCTAAAAACAGCTCTCCAATTGCTGAGTGTGCCAACTCAGGCTGTGTCAAACCTCGATGAATCTGCCCCTTTGGATGACCCACAGTCCCTACCTTCTGATGACACAGACAGTGTGATGGGACAGCTGGTGTTTGGGAACGATATTGATGCAGTGGACATCGCAGTAAGAGTAGCCATGGTCCAGTTTTTTACATCACCAAATATTCTGGGTGGCATCAAAGAGCACACCAGAACACTGAGATTATTTTCTCGTCCAGTGGTGGCATTGCAGAGAGGGCCTTTCTTAAAATCAAGGACTAACATGTCTGAGTTTGTTCTCTTGCTCTCTGAATCACAGCTGAGAAATGTCAACAGTCTCTGTGATGTACAAGCTTCATTTACTTTACCCAGGATGACAGTGACAAAGGGAAATATGTTGGAAGTTGAGAGCATTCACGATATCAGAGGAAGCCTGACACACAAACAACAGGAACCATCTGATTCAGGAATGCCAGATTCAGTTGGTGGTTCTCTCAGCAGTGGCGACTCCTGCTCTGTCCTAGATGATGACAGTGAAGATTTCTCGTATTCAGTGTCAAATCCACCCACTCCTAAACTTTCCAGGGGTAAGATCACATCTGACACAGATAGTGAAAACACATTTGTGACTGGGACCTCATCGCAGTCAAGCTCTTCAACACGCACCAATACATCCCATGAAAAACAAAACAGTATGTTTCTGAATAGCACAGAAGCTGTCATGGGTTTGTGGAACAGTTTCAAAAAGTCAACTGTCAGTGTTACCTCAAAACCAGCACAGACAGACACTGCTGAAAAAGCTGCAGTAAATGGATTTGCAAAGAAGATTACAACCAATCCAGTTTTGGATAAAGTCTCACCTCAAGAAGAAAAGGCTGCTTTCTTTCCCTTTCCTGGAATTCGACAGAAACCGACATTACCAGGTGAGAAAGTTCAAGGAAGACCTCCCCTGATAAAACAGACTTCAACAGAAAAGCAAATTCAAAGTGAAAATCAACAGTTTTTGAAAGACATCTTACGCAGCGTCATGAAAGGAGATGGTGTGAGTTGGTTTGTGACAAAGAGGCTCCGCAAGTTGATGTGTGATGAGTCTTTGAGAGTGATGGTGGCAAATCGTCTCTATGGTGCTCCCTCTGCAGACAAGAATTCAGATGCTGTGGATGACATGCCAAAACTCTGGTGGAACACCTTGTCTTCATTCTCTCTGGGATGGTCTTCATCGTCTTCTTCCTCCTCTACTTGGAGCACTGGGACTGACTCAACCCAGTCTCCTCTTCCTGGAGCCAAGCGAGTGTCTCGCAATGTCTTCAAAGGAATGTTGGAAATCCTAAAGGCGGTAGTTTATGGCTTGGAAGTCAGTATGGAGAACGAGGACATAGGAGGGATCGCGTCGGCATTCCAATTTCTTGAGATTGCTCACATTCACTATTATGGCCGAGACATCAAGGAAGAGGAGGCAAGGATGCGCGACGACGACGAGATGTCAGTTATTTCCAACACAGATAGCACCATCTCGAACTTATCGGATCATTCGCGTGACATGTCGTCCATTCACTCATGGGTTGCTGAGACAGGCAAGAGGCATGCTCTGTTGAATGGCAAAGGTGACAGAGACAGTGGTCACGGCGAGATGAGTGACTCTAACAGCGATATTGAGACGGTCATATCATCAGTGTCACACAACAGTGAGGAGTCACGTTTCTCGCATGAGCGTGTGTCACGCTCAAACAGTGATTTTGCCGCATCACTGAGTCATAGAGAAAAGACAGCATTAAGAGATAGAGTGACCAGAAGTCGATCCATTGACCAAACAAGAGGTCAGGAACTAGCAAGAATAAGTAAAGAAGAGAAATTAAGACAGGAGCGCTGTAAAAACCCAGCAATAGCGCACATGAAGTTAAATAACAATATGTCCCGGCGCAGTTCCATTGATCGCACCAGTCAAATCTCATCATCGGTCCCACCTAACCCATTGCTCCGAAAAAGCAATTTGAATAAAGGTTTCCGTTACTATAATGGGGACATCTTTCCCATAGAAGATGAGGACGGACGAAGGAGTACTGGTCGACGATATCTTTTTGAGGGATTGCTGGCAGAGAGGTCATCTTTGTGGGACAACATGGATTTCTGGGAAAACATTTTTCTAGATGCAGTGGCCACTGAAAGGGAAGCAGTACAACTCGCTAGGGCCCGCCGAAAAGAAACGCTTGGAAGAGGATGA

Transcript

amic_s0158.g19.t2

AGAAAAGCAGGCGGAACCATTTTGCCTCCTGCGGCTGCTGTGCTGGAAACTGCCAGAGCGGACTGATTTCATGCTCTGTTCACCACGGAAGTGGCCATTATGTAGATATTTCACGACTTCTTAAGTTTAGGTGGCGCTAAAATAACAACGATGGACTCTGCACATAGCAATTTACCTTCAAGACTTATCGACTATCTTGTTGTTGTTGGCGCTCGTAAACCGACTGTGGATGCTACCGAAACGCCAGAACTCTTGCGGCGATTTCCACAGAAAGACCATGAAGACTTCGTGTTGCCTGGGGACGTGGTCTTCTTTTGCCAACCAGAAGGCTGTAACACAGTGTCGAAAAAGTTCTCATTACGGGAAGCAAACTCGTTTGCTTTTACGCTGACTGAGAAAGATTCGGGTAATGTTCGATATGGGATCTGTGTTAATGTGTTTCGTCCGTGTCTGAATTTTATTCCAAAGGAACGGACAGATTACAAAGACACTAAACTGATGGTTCGGAAGAGATCTCGTTACAAACGGGATTTCTGTATGAGTTTGACGTCTTTGTGTATTATATCTCATCACCCGTTCTTTCCGACGTTCAGGGAGTGCCTGTTTTTCCTTCGCAAAATGATCGACTCGAGAACGGGTCTTACCTCGAAGTTGGACAAAAACGATAACATTGTACCGGGCATTAACAGCTGGTCTGTGTTTACATGCACTGAGGACCAGAAAACAAGCCATTTGGCAAGCGACATGGATGAGGTAGAAACGTGGATTCAACGCCTTTTGCTTGCACAAGCTCCTGTAGCTGGAAGAACCCGTGTAGAACTTCATCTGCACTCTCCGGACACTTACACACCTTTGACCTTTGCGTTGCCAGAAACGAATCGATTTCCACTCATAGATTTTCCCATCCACATCCCCTTGGAGCTGCTTGGTGTGGAAACTTGTTTGAAAGTTTTAACATGTATATTGCTCGAACACAAGGTTGTAATCCAATCTAGGGACTACAATGCCCTTACTATGAGTGTGATAGCTCTAACATCTCTGCTTTATCCCTTGGAGTATATGTTTCCTGTCATTCCATTGCTACCTACATGTATGAACAGTGCAGAACAGCTGTTACTGGCTCCAACACCATTTGTGATTGGTGTTCCTGCAAGCTTCTTTCGATACAAGTGTGATGGCTTTCAGATGCCTGGGGATGTGTGGATTGTTGACCTGGATTCAAATAAGATCACTGTTCCTCTGACGGCAGATGAATTACCCCCTCTTCCGCAACCTGAGGGAGCTATACTCACTAGGAACCTAAAAACAGCTCTCCAATTGCTGAGTGTGCCAACTCAGGCTGTGTCAAACCTCGATGAATCTGCCCCTTTGGATGACCCACAGTCCCTACCTTCTGATGACACAGACAGTGTGATGGGACAGCTGGTGTTTGGGAACGATATTGATGCAGTGGACATCGCAGTAAGAGTAGCCATGGTCCAGTTTTTTACATCACCAAATATTCTGGGTGGCATCAAAGAGCACACCAGAACACTGAGATTATTTTCTCGTCCAGTGGTGGCATTGCAGAGAGGGCCTTTCTTAAAATCAAGGACTAACATGTCTGAGTTTGTTCTCTTGCTCTCTGAATCACAGCTGAGAAATGTCAACAGTCTCTGTGATGTACAAGCTTCATTTACTTTACCCAGGATGACAGTGACAAAGGGAAATATGTTGGAAGTTGAGAGCATTCACGATATCAGAGGAAGCCTGACACACAAACAACAGGAACCATCTGATTCAGGAATGCCAGATTCAGTTGGTGGTTCTCTCAGCAGTGGCGACTCCTGCTCTGTCCTAGATGATGACAGTGAAGATTTCTCGTATTCAGTGTCAAATCCACCCACTCCTAAACTTTCCAGGGGTAAGATCACATCTGACACAGATAGTGAAAACACATTTGTGACTGGGACCTCATCGCAGTCAAGCTCTTCAACACGCACCAATACATCCCATGAAAAACAAAACAGTATGTTTCTGAATAGCACAGAAGCTGTCATGGGTTTGTGGAACAGTTTCAAAAAGTCAACTGTCAGTGTTACCTCAAAACCAGCACAGACAGACACTGCTGAAAAAGCTGCAGTAAATGGATTTGCAAAGAAGATTACAACCAATCCAGTTTTGGATAAAGTCTCACCTCAAGAAGAAAAGGCTGCTTTCTTTCCCTTTCCTGGAATTCGACAGAAACCGACATTACCAGGTGAGAAAGTTCAAGGAAGACCTCCCCTGATAAAACAGACTTCAACAGAAAAGCAAATTCAAAGTGAAAATCAACAGTTTTTGAAAGACATCTTACGCAGCGTCATGAAAGGAGATGGTGTGAGTTGGTTTGTGACAAAGAGGCTCCGCAAGTTGATGTGTGATGAGTCTTTGAGAGTGATGGTGGCAAATCGTCTCTATGGTGCTCCCTCTGCAGACAAGAATTCAGATGCTGTGGATGACATGCCAAAACTCTGGTGGAACACCTTGTCTTCATTCTCTCTGGGATGGTCTTCATCGTCTTCTTCCTCCTCTACTTGGAGCACTGGGACTGACTCAACCCAGTCTCCTCTTCCTGGAGCCAAGCGAGTGTCTCGCAATGTCTTCAAAGGAATGTTGGAAATCCTAAAGGCGGTAGTTTATGGCTTGGAAGTCAGTATGGAGAACGAGGACATAGGAGGGATCGCGTCGGCATTCCAATTTCTTGAGATTGCTCACATTCACTATTATGGCCGAGACATCAAGGAAGAGGAGGCAAGGATGCGCGACGACGACGAGATGTCAGTTATTTCCAACACAGATAGCACCATCTCGAACTTATCGGATCATTCGCGTGACATGTCGTCCATTCACTCATGGGTTGCTGAGACAGGCAAGAGGCATGCTCTGTTGAATGGCAAAGGTGACAGAGACAGTGGTCACGGCGAGATGAGTGACTCTAACAGCGATATTGAGACGGTCATATCATCAGTGTCACACAACAGTGAGGAGTCACGTTTCTCGCATGAGCGTGTGTCACGCTCAAACAGTGATTTTGCCGCATCACTGAGTCATAGAGAAAAGACAGCATTAAGAGATAGAGTGACCAGAAGTCGATCCATTGACCAAACAAGAGGTCAGGAACTAGCAAGAATAAGTAAAGAAGAGAAATTAAGACAGGAGCGCTGTAAAAACCCAGCAATAGCGCACATGAAGTTAAATAACAATATGTCCCGGCGCAGTTCCATTGATCGCACCAGTCAAATCTCATCATCGGTCCCACCTAACCCATTGCTCCGAAAAAGCAATTTGAATAAAGGTTTCCGTTACTATAATGGGGACATCTTTCCCATAGAAGATGAGGACGGACGAAGGAGTACTGGTCGACGATATCTTTTTGAGGGATTGCTGGCAGAGAGGTCATCTTTGTGGGACAACATGGATTTCTGGGAAAACATTTTTCTAGATGCAGTGGCCACTGAAAGGGAAGCAGTACAACTCGCTAGGGCCCGCCGAAAAGAAACGCTTGGAAGAGGATGAAGACAGGTTGTTGGCCACCATGTTGTACAATTTGGTTGCGTTTATGACTGCGCTAAACGTGGGCAAAGATACAATGAAGAAGAAAGTACGGAGGTTGCTGGGAAAGTCGCACATTGGATTACTACAGAGCCAACAAGTCAACGACTTGCTTGATAACTTGCAAAGTCTGAATGGTAATGACATCGATCTCAAGCCCGCTGGCAGCCGGCAGATGCTTAAACATTCTTTCGTTGTTCATTCTGGTGACTCGATGAACGGAGATGTGTTTTTCATGGAGGTGTGCGACGATTGTATTTTGCTGAGAACTGGCGTGGGCGCCATCGTGGAGAGGTGGTGGTATGAGAAACTTGTCAACATCACGTATTGTCCAAAGACTAAAGTGATGTGCTTGTGGTGTCGGCAAAAGGACGAGACAATTCTCAACAAGTTTTGCACCAAAAAGTGTAAGGCTTTGTATTTCTGCATCAAGGAAAGTTTGCAAAGAGCAGCAGACAGACTAAGTGACAAAGGAACAGGAGTCCAACTTGGCGGAGACTTTCCTGTTAAGGATCTTAGCACCGATGAAGATGGCCATCTGCAGGTCACACTCGAGGGCATCGGCTTGAAATTTGAAACGAGGAGGGTGCACATCGACTTGTGTCACATCAGGAATTGCTCGACGCAAGGAGGCGTGTTTCTTTTAGAAGAATATGTACCAGCGACTCAAGGGACAATTACGCACAGATTTGGGTCACAAAAGTGCAACCAAATCTGCTACGCCGTCCTGTGTTTGTTTTCGTACGTGGCCGCCTCAAAGAATTCAAACAGCACGAGTTGATGAGCCACGTTAAAGGTGTGCGCAGTTCAAGAACGCCGCGTAGAGCATACAGCGTCAGCGATACCCGCCTATCCCCGCCACCCCTCCCTGGTGTGTCACGCATGACGCAGCACTGAAGACGATTATCGTTTGCATGATGAGAAAGGGACGCTAGAGTTTCTTCTTCTACCGTTACTTTTGAAACAGCACTCCATAATATAAATTAACTGTCTTAAGTTGAGTTTTCGAAAACGAAAATGCTATTAACTGATTAAGTTATTCTTTCGTTAATTGCACGTGAGAATTATAGATCTTTTTGGAAATGGCTCGCACAATCCGTGCACTTACGTGTACTGTACTTGCTTCAACGAAAATTCGTGCAGGCTGTCAAGGCTGGCTCATACCGGAGATCGCAACCGCAGGAAACACAACAAATTTTATCAACTTAATACGAAGAAAACTTAAATTGAAGAACTCTTGCGAGCTTCTTCCGTGGTATCTCTATATTGGAAAACGACTTCTCCTGTGAATCTTCCCACGTCTCTCGAATTTTCTTGCTTGCATCGCACATGTGAGCCTGGCTTGATTCATTTTTCCCTCTTTGCCCCAAACCCTCACCATATCTAATTTTGTCTGTGACTTACATTTCACTGTCTTTGTAAACTTGATTGGAATTTCATCTATTACTCAAAGTTTTGAATTTAACCACGAAATTGTTTGCCCGTACCTTTTTGAAAGCAAGATTTGGCCTCCTATGGGATTTTTAAGAAAACGTAAGCCATCTATATACGCGACCGAAACATTCGTTTTCTTGGGCTGTTTGTTCCGATCGCCGATTAAGCAACTGAGATAGAGTTCTTACGAGTTACTTCTTTAGGTAAAATATATGTACGCATGGTTAGTTTGTAACTTTGATTCTTATTAAGTCATCAAATTATCGTGCCTAGATTTTCGTCGTTTCGATTTTCGGTAAAATCAAGATTAGGATACGAGGCAAATTTTGTAATAGCTGCAAAATCCGCTGTAGCCAGGCCAATGCTTCTCAGAGATATTACTACATtaatcacaactatatcaaaattctcgaatctgattggtcctcaacagccctgatttcagccTGAATCTATTTAAAGAATACATCATTGACTTTTAGGCGGTATTTCTGTCAAAAGTACAGAAAGACCGTGAAATTAACCGGGATCAAGAGAATTAAATTTTCGGAAAATGAGCTCTCCGATTATTATTCCAGTGGCCACACATTTTATGACAGAAGCAGTCTAATTAATGAAATTGTATTTAATTCATCATGGCGCACCATCGAATTATGGTTCATCGACAGATGTTCTTGCGCAGTCAATTAGCAAGCTAGTATTCAGGCTGCACAAGAAAAATTCTTTTCATAGATGCAAATCGCCGCGAATGAATTTCGTCTTACTATTAAACCAAGGAATTACGATATGTTGTAAAAATTTAAGTTATGAAAAGTCATCATGTTGGGTGAAGCTAAAAAAATTGGTGTACATTTGTTGCAATTTATTGTACCCTAAAAATTGGAAGGTACAGAATTAAATTGTGAATAACGTAACTTAAACTTTGTTACCCATACGCAAAATACGATAGCATTATCAGCTAAATGACAAATTCTTGTAAATAAACTCTTGTATTAGGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80U28	MAP kinase-activating death domain protein OS=Mus musculus OX=10090 GN=Madd PE=1 SV=2
O08873	MAP kinase-activating death domain protein OS=Rattus norvegicus OX=10116 GN=Madd PE=1 SV=1
Q8WXG6	MAP kinase-activating death domain protein OS=Homo sapiens OX=9606 GN=MADD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002435 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03456 all species →	uDENN	uDENN domain	Domain	Interproscan
PF02141 all species →	DENN	DENN (AEX-3) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005113 all species →	Domain	uDENN domain	Interproscan
IPR039980 all species →	Family	MAP kinase-activating death domain protein	Interproscan
IPR001194 all species →	Domain	cDENN domain	Interproscan
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13008 all species →	MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0032483 all species →	Biological Process	regulation of Rab protein signal transduction	Interproscan
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0158.g19.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.