Detailed information of amic_s0160.g10.t1 in Acropora microphthalma

Genomic Location: sc0000160_pilon:87046...93227
NR annotation: XP_029213288.2, glycine betaine transporter 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q87NG3Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1
Q87PP5Glycine betaine/proline/choline/ectoine transporter VP1456 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1456 PE=1 SV=1
Q6F754Glycine betaine transporter OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=ACIAD3460 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000591 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749
all species →		PLAC8PLAC8 familyFamilyInterproscan
PF02028
all species →		BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018093
all species →		Conserved_siteBCCT transporter, conserved siteInterproscan
IPR006461
all species →		FamilyPLAC8 motif-containing proteinInterproscan
IPR000060
all species →		FamilyBCCT transporter familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047
all species →		HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006810
all species →		Biological ProcesstransportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705
all species →		Biological Processnitrogen compound transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0160.g10.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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