Detailed information of amic_s0160.g35.t1 in Acropora microphthalma

Genomic Location: sc0000160_pilon:335046...350345
NR annotation: XP_044164276.1, uncharacterized protein LOC114976897 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1D5PXA5Transient receptor potential cation channel subfamily V member 4 OS=Gallus gallus OX=9031 GN=TRPV4 PE=1 SV=1
Q9HBA0Transient receptor potential cation channel subfamily V member 4 OS=Homo sapiens OX=9606 GN=TRPV4 PE=1 SV=2
Q9ERZ8Transient receptor potential cation channel subfamily V member 4 OS=Rattus norvegicus OX=10116 GN=Trpv4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000582 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024862
all species →		FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10582
all species →		TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0160.g35.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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