Detailed information of amic_s0160.g44.t1 in Acropora microphthalma

Genomic Location: sc0000160_pilon:446705...478225
NR annotation: XP_044164160.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114963076 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P04114Apolipoprotein B-100 OS=Homo sapiens OX=9606 GN=APOB PE=1 SV=3
E9Q414Apolipoprotein B-100 OS=Mus musculus OX=10090 GN=Apob PE=1 SV=1
Q6RG02Vitellogenin OS=Penaeus merguiensis OX=71412 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001514 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06448
all species →		DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF00094
all species →		VWDvon Willebrand factor type D domainDomainInterproscan
PF01347
all species →		Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172
all species →		Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015255
all species →		DomainVitellinogen, open beta-sheetInterproscan
IPR001747
all species →		DomainVitellogenin, N-terminalInterproscan
IPR015816
all species →		Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR050733
all species →		FamilyVitellogenin/ApolipophorinInterproscan
IPR009454
all species →		DomainLipid transport, open beta-sheetInterproscan
IPR015819
all species →		Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR001846
all species →		Domainvon Willebrand factor, type D domainInterproscan
IPR011030
all species →		Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015817
all species →		Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345
all species →		VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →		Molecular Functionlipid transporter activityInterproscan
GO:0006869
all species →		Biological Processlipid transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0160.g44.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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