Detailed information of amic_s0164.g11.t1 in Acropora microphthalma

Genomic Location: sc0000164_pilon:222793...236005
NR annotation: XP_029201465.2, tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32M08tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus4l PE=2 SV=1
O95620tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens OX=9606 GN=DUS4L PE=1 SV=2
O74553tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001339 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01207
all species →		DusDihydrouridine synthase (Dus)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR035587
all species →		DomainDUS-like, FMN-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11082
all species →		TRNA-DIHYDROURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0017150
all species →		Molecular FunctiontRNA dihydrouridine synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05545DUS4; tRNA-dihydrouridine synthase 4EC:1.3.1.90
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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