Detailed information of amic_s0165.g55.t2 in Acropora microphthalma

Genomic Location: sc0000165_pilon:1438661...1487508
NR annotation: XP_029186888.2, sortilin-related receptor-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
P0DSP1Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR006581DomainVPS10Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR000742DomainEGF-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24498SORL1; sortilin-related receptor-Membrane traffickingko04131deepkoala

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