Detailed information of amic_s0165.g55.t3 in Acropora microphthalma

Genomic Location: sc0000165_pilon:1438661...1470065
NR annotation: XP_029186888.2, sortilin-related receptor-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
P0DSP1Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR006581DomainVPS10Interproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR031778DomainSortilin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

TOP