Gene detail

Detailed information of amic_s0168.g4.t2 in Acropora microphthalma

Genomic Location: sc0000168_pilon:22577...52585
NR annotation: XP_029213397.2, 2-aminomuconic semialdehyde dehydrogenase-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0168.g4.t2

ATGCCCGTTGCGAGCAGCTGCCAGTGCAAAGTTTCCCTAGCAGGACGAACAAGAACACAAACACAGCCACTCATGGACTTTATTGCGCAAATAAATCAGCTTTTCAGACGTGGAGAAATTTCGGACAACATTTATAATTTCATCAATGGCGAGTTCGTTCCTCCGGACAGCGGCGAATTTGGTGATACACACAATCCAAGCACAGGAGAAGCATTATGCAAATATCCACTTTCCAGTGTTTTCGATCTTCAAAAAGCAATTGAAGCAGCCAGTTCAGCATATCATATTTGGAAAAGGCAGTCTACGGTCGAAAGAGCCGAAGTGTTGAGCCTAATGGCCAATCTTTTCGAGAAGAGGTCAGAGCTTTTTCTTCGAGCTGAAATCTTGGATCAAGGACGAGCGATTCAGGGCGCGTTCAAAGACGACAATGATGTGGCGAGAGAAGTCCCTGTGATCAAACATTTCCTTGCACAGGCAATGGCAAGGACGGAATCTTCGACGAAGACGAGAGATTCTATCAGTTACTCAACCCGTTATCCATTGGGTGTGGTCGGAATAATCACCTCGTGGGCTTCTCCTCTGCGCTCTGTTTTGTGGCATGCGATCCCAGCACTGGCTTGTGGGAACACTGTTATAATTAAACCGTCGTGTTTGGCGCCGCTTGAGGTTCACCTACTCGCTAAAACTTTCAGTGATGCAGGATTACCGAAAGGTGTGGTCAATGTTGTTTATGGTAAAGGTGATGTTGTGGGCAAAGCTCTAAGTGCATCTTCTGTTGTAAAAGCTCTGGCATTTGTTGGAAATGAAAGAACAGCCTCCACTATATTGAGAGAATGTCAACTTCTTGTTACAAAAAAATTTTCATTCAGCTTGGGAAACTGTCATCCAATGATTATCTGCTATGACGCTGATCTCGACGAAGCGCTTCCCATCGCCATTAAAGGGAGttttctACAAAACGAGGGACAAAACGTTCATTCTATCAATCGCATTTTCGTTCAAGCATCCCTCCTCGAAACGTTCACCGACAGATTTATCAGAGTTGTACAGAGATTGAAGATTGGCAGCCCCCATGAAAGTAGCATACAAGTTGGTCCCTTAATAAGCAATGAACATAGACAAAAGATCATTGCGATTATTCAAGGTGCAGTAAATGATGGTGCAGAGATTTTATGTGGAGGAAAAATTCCCAAATTTGACAACAAATTGGATAGAGGATACTTTTTGGAGCCTACAGTTCTTGGTGGTTTTCAGAGTTCCATCGTCAACTCGATTAACTCGTTGGAGGTGCAAGGACCAGTGGTCAGATTGATACCATTTAACAGTATCAACGACGCGATAGATGGGGCCAATGCGACGTTGTATGGACTCTCTGCTTCAGTCTGGTGCAAGGATATCAGTTTAGCTCATACCATTGCAGATCGGTTAAATGTGGGTTCTGTGTGGATTAACAGCTGGTTACCCAACAACCCCAGCATGCCGTACGAGGGATGGAAGAGCAGTGGATTGGGGCGAACAGGAGGTGCCTACTCAATGGACTTTTACACCGAAATTAAAACTGTACACGCATACAGACAGAGTATTTATGGAAGAAAGTACGTATGGATTCTTCCTGGTTGGTACAGTGAAAACTGGTGGGAAAATTCAGGCGACAGTCCATGCACCGTACACCAAATAATGGAAGCGGCTGGAAACTACCTAGCGACCAGGCCTCTTCAGCTTGGTACATCCACGACGTCAACGATTGCTGGGAAGACTGTAACTGAGCTTCATAACGAACTAGATGACATCATCCGTAGCCATGCTTACCCGGTTAATGCATTCTCTTCTTTCGCTTATGATGCAATATGGAAGATATACTGCGAAATTTGTCATTTTACGGCATGTCGGCAAGGTCTTGTAAAATTTGATGAACACGGCGACAGAGAGACCTCAATAGAAATACTACAACTACAAGGCGATGCGAGAGTTGTTGTTAGCCTTTACAACAAATCAAAAACCGATTTGGATGGTTCACTTATGAAGTGGGATGGAAAGCTTCCAAAAGATGGTGTAATCATAAAAACCAAGGCAAATGAAGATTCCGTGGCGTACACAGTGACAATAATCTGTCTTTCTATTGGCGGGATAGTGGTTTCATTCCTTTGCTTGGCCGTGAATATAGCTTTCAGGAAACACAGAGTTATCAAGATGTCGTCTCCGCATTTCAACAACATAACCGCCGTTGGTGGTTTCATCTGTTATCTCTACGTTATTTTGGGCACAGTCAACCATTCAAGAACCTATTTTGGTGAATCTCATAATGTTTGTACGATAAGGGCGTACCTCATTGTGATAGGTTTTACATTAGTGTTTGGAGGGATGTTTGCCAAAACCTGGCGAGTGTACAAGATATTTACCAATAGACGTTTGAAGAGAGAAATAGGTGGGCTGAGTACAGTACAGTTAATGCTGGGAATATTTTGCATATTAGTTTTCGATATTGTGGTACTTGTCAGCTGGAATTTAATCGATCCAATGCAATTGAGGACTGTTGAAATCTCGGTGAACACAAATCAGGAAGACATAGAAATCCACACAACCACCCAGCAATGTGTGTCGAATTATTACTCCTCTTGGATCATTGGTTTGATTCTCTTCAAAGGAGCTCTTCTCCTCTTTGGCGTTTTCCTTGCCTGGGAAACTAGAAATGTTCATTACGCTGAACTCAACGATTCCAGAAACATCGGTGTGGCAGTTTATAACATTTTACTTTTTTCTGGAGTGTCCATCACTGCAGAGTTTGTTTTAAGTGACTTAATGGCCAAACGAATATTCAATAATTCTGTGATTTATTTGTGTGCAACTATGGTGTTGGGACTGGTTTTCATCCCAAAGATCTCTCGCCTTGCGCGCAGAACAAAAGTTCAGCCGGATGAGGGCCAACAGCAAAATAAAACCCAAATTTCAACTTCTCAAAGGGAGGCAGACTCTCAGGCTTCAAGAGAATGA

Transcript

amic_s0168.g4.t2

CAGTCTGCAGTTCGTGTTTTGCAATTCAAAACGCTTAATTTATGCCCGTTGCGAGCAGCTGCCAGTGCAAAGTTTCCCTAGCAGGACGAACAAGAACACAAACACAGCCACTCATGGACTTTATTGCGCAAATAAATCAGCTTTTCAGACGTGGAGAAATTTCGGACAACATTTATAATTTCATCAATGGCGAGTTCGTTCCTCCGGACAGCGGCGAATTTGGTGATACACACAATCCAAGCACAGGAGAAGCATTATGCAAATATCCACTTTCCAGTGTTTTCGATCTTCAAAAAGCAATTGAAGCAGCCAGTTCAGCATATCATATTTGGAAAAGGCAGTCTACGGTCGAAAGAGCCGAAGTGTTGAGCCTAATGGCCAATCTTTTCGAGAAGAGGTCAGAGCTTTTTCTTCGAGCTGAAATCTTGGATCAAGGACGAGCGATTCAGGGCGCGTTCAAAGACGACAATGATGTGGCGAGAGAAGTCCCTGTGATCAAACATTTCCTTGCACAGGCAATGGCAAGGACGGAATCTTCGACGAAGACGAGAGATTCTATCAGTTACTCAACCCGTTATCCATTGGGTGTGGTCGGAATAATCACCTCGTGGGCTTCTCCTCTGCGCTCTGTTTTGTGGCATGCGATCCCAGCACTGGCTTGTGGGAACACTGTTATAATTAAACCGTCGTGTTTGGCGCCGCTTGAGGTTCACCTACTCGCTAAAACTTTCAGTGATGCAGGATTACCGAAAGGTGTGGTCAATGTTGTTTATGGTAAAGGTGATGTTGTGGGCAAAGCTCTAAGTGCATCTTCTGTTGTAAAAGCTCTGGCATTTGTTGGAAATGAAAGAACAGCCTCCACTATATTGAGAGAATGTCAACTTCTTGTTACAAAAAAATTTTCATTCAGCTTGGGAAACTGTCATCCAATGATTATCTGCTATGACGCTGATCTCGACGAAGCGCTTCCCATCGCCATTAAAGGGAGttttctACAAAACGAGGGACAAAACGTTCATTCTATCAATCGCATTTTCGTTCAAGCATCCCTCCTCGAAACGTTCACCGACAGATTTATCAGAGTTGTACAGAGATTGAAGATTGGCAGCCCCCATGAAAGTAGCATACAAGTTGGTCCCTTAATAAGCAATGAACATAGACAAAAGATCATTGCGATTATTCAAGGTGCAGTAAATGATGGTGCAGAGATTTTATGTGGAGGAAAAATTCCCAAATTTGACAACAAATTGGATAGAGGATACTTTTTGGAGCCTACAGTTCTTGGTGGTTTTCAGAGTTCCATCGTCAACTCGATTAACTCGTTGGAGGTGCAAGGACCAGTGGTCAGATTGATACCATTTAACAGTATCAACGACGCGATAGATGGGGCCAATGCGACGTTGTATGGACTCTCTGCTTCAGTCTGGTGCAAGGATATCAGTTTAGCTCATACCATTGCAGATCGGTTAAATGTGGGTTCTGTGTGGATTAACAGCTGGTTACCCAACAACCCCAGCATGCCGTACGAGGGATGGAAGAGCAGTGGATTGGGGCGAACAGGAGGTGCCTACTCAATGGACTTTTACACCGAAATTAAAACTGTACACGCATACAGACAGAGTATTTATGGAAGAAAGTACGTATGGATTCTTCCTGGTTGGTACAGTGAAAACTGGTGGGAAAATTCAGGCGACAGTCCATGCACCGTACACCAAATAATGGAAGCGGCTGGAAACTACCTAGCGACCAGGCCTCTTCAGCTTGGTACATCCACGACGTCAACGATTGCTGGGAAGACTGTAACTGAGCTTCATAACGAACTAGATGACATCATCCGTAGCCATGCTTACCCGGTTAATGCATTCTCTTCTTTCGCTTATGATGCAATATGGAAGATATACTGCGAAATTTGTCATTTTACGGCATGTCGGCAAGGTCTTGTAAAATTTGATGAACACGGCGACAGAGAGACCTCAATAGAAATACTACAACTACAAGGCGATGCGAGAGTTGTTGTTAGCCTTTACAACAAATCAAAAACCGATTTGGATGGTTCACTTATGAAGTGGGATGGAAAGCTTCCAAAAGATGGTGTAATCATAAAAACCAAGGCAAATGAAGATTCCGTGGCGTACACAGTGACAATAATCTGTCTTTCTATTGGCGGGATAGTGGTTTCATTCCTTTGCTTGGCCGTGAATATAGCTTTCAGGAAACACAGAGTTATCAAGATGTCGTCTCCGCATTTCAACAACATAACCGCCGTTGGTGGTTTCATCTGTTATCTCTACGTTATTTTGGGCACAGTCAACCATTCAAGAACCTATTTTGGTGAATCTCATAATGTTTGTACGATAAGGGCGTACCTCATTGTGATAGGTTTTACATTAGTGTTTGGAGGGATGTTTGCCAAAACCTGGCGAGTGTACAAGATATTTACCAATAGACGTTTGAAGAGAGAAATAGGTGGGCTGAGTACAGTACAGTTAATGCTGGGAATATTTTGCATATTAGTTTTCGATATTGTGGTACTTGTCAGCTGGAATTTAATCGATCCAATGCAATTGAGGACTGTTGAAATCTCGGTGAACACAAATCAGGAAGACATAGAAATCCACACAACCACCCAGCAATGTGTGTCGAATTATTACTCCTCTTGGATCATTGGTTTGATTCTCTTCAAAGGAGCTCTTCTCCTCTTTGGCGTTTTCCTTGCCTGGGAAACTAGAAATGTTCATTACGCTGAACTCAACGATTCCAGAAACATCGGTGTGGCAGTTTATAACATTTTACTTTTTTCTGGAGTGTCCATCACTGCAGAGTTTGTTTTAAGTGACTTAATGGCCAAACGAATATTCAATAATTCTGTGATTTATTTGTGTGCAACTATGGTGTTGGGACTGGTTTTCATCCCAAAGATCTCTCGCCTTGCGCGCAGAACAAAAGTTCAGCCGGATGAGGGCCAACAGCAAAATAAAACCCAAATTTCAACTTCTCAAAGGGAGGCAGACTCTCAGGCTTCAAGAGAATGATGAGTTCTATGCGCAAATCAGTTATAAACGATAAAATCAAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H2A2	2-aminomuconic semialdehyde dehydrogenase OS=Homo sapiens OX=9606 GN=ALDH8A1 PE=1 SV=1
Q8BH00	2-aminomuconic semialdehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh8a1 PE=1 SV=1
Q66I21	2-aminomuconic semialdehyde dehydrogenase OS=Danio rerio OX=7955 GN=aldh8a1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000397 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00003 all species →	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017978 all species →	Domain	GPCR family 3, C-terminal	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016163 all species →	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43720 all species →	2-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0168.g4.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.