Detailed information of amic_s0169.g13.t1 in Acropora microphthalma

Genomic Location: sc0000169_pilon:175779...181895
NR annotation: XP_015750785.1, PREDICTED: uncharacterized protein LOC107330734 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000144 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF04434
all species →		SWIMSWIM zinc fingerDomainInterproscan
PF15299
all species →		ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF21056
all species →		ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR007527
all species →		DomainZinc finger, SWIM-typeInterproscan
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR029309
all species →		FamilyCalcium-responsive transcription factorInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR048324
all species →		DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456
all species →		PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0169.g13.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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