Gene detail

Detailed information of amic_s0169.g83.t1 in Acropora microphthalma

Genomic Location: sc0000169_pilon:1015990...1018769
NR annotation: XP_029187091.1, palmitoyl-protein thioesterase ABHD10, mitochondrial-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0169.g83.t1

ATATGTCAAAACCAAAATGGCAGCGAAATGAGGCCCGTTAGGAATTTAGTTTTTCCTCGAACAACTGTTAAAGGTGTGAAGAGAATGAGTTCATTTGCGGAGTCGAAAGTTCAGTATATATCATCGACCTCTGGAGAACCTATAGCCTTTCAACATACGTTTGGAAAGTTACCCGGAGTGATATTTTTGCCCGGGCTAATGTCGACCATGTCTGGAACGAAAGCCACGGCTCTCGAAAAGTACTGCGAAGAAATTGGTCATTCTTATATCAGGTTTGATTACAGGGGACATGGCATGTCTGGTGGGAAAAGCCATGAATGTACAGTCGGGATGAGGAAGGAGGATGTGTTGACCATTCTTGATAATGTAGGCGAAGGTCCTCGAATTCTTGTTGGCTCAAGCCTGGGTGGATGGGTCATGTTGCTGGTTGCCATGGAGAGACCTGATCAAATCAAAGGTCTTATAGGAGTGGCCACTGCTGTGGAATATTTAACTCGGCGGTACGATCAACTTCCTGATAGTTCCAAAAGGCAAGTGGAATCCACTGGAAAATGGGTAATACCTTCGGAGTACAGCCCAAATGAACCTTATATTTTGGATTTTCATGTGATACAAGAAGCGCGCAAACACATTTTACCAGAGGGTGAGATGTACCCAATCCATTGCCCTGTTCGTCTTCTCCATGGAAAGGAAGACAGAGATGTACCATACCAGGTTTCAATGGATTTGGTTGGGCAAATTGCAAGCGAAGACGTCCGCTTGACACTCTTTCATAATGGCGATCACAGACTTTCAGATGAGAATAAGATTGAATTTTTAACCGAAACACTTGGAAATTTGATTGACCAGGTTATGTCATGAAGAACCAAGAGAATATTGgttatgcatcagtcaattccagctacaccctgcctcctccccgccccccacttccccccggggctaactcctgggaattttttttcttatggatggcaaatttatgggagcagggttacttaagctgtcaaatggctggtggtgaggacaaaagtaaagggcattatgcatgccccatcatgcataatgaatcaagtacggccagttgtgaaacacaacaatttatatacgctcccactatttgctttgaaattatggcttttttagattaaagaacatattaaaattaagaaaatgtaGGTACCTTGGgtttggctaatgcctggcccctgggtcactctaaagtagcaagaagccccactcctggtttactctaaagtagcaaaaagccccaccactgggactgacaagatgggcaaatgccctgcagttgtgcagggggggtagggcatagctggaattgactgatgcattaGCAATATTGCATAGGGTGATATAGCAATGGATAGCGATCTCCTCAATTAGTTTAAGTTAATTGAATAAAAGCCACAGGCAAGATAAGAAGCTGGCGAGATAAAATCCCACACTAGAGGTGAACATATGTTATCAGATTACAAAATTCTTACATTAGAGATGAGGAGAAGTTTGTCACAAGTAATTCAGTAAGTAAACTGCATTACTGAGGATAAAGGGTAGACCTGTAACTTCTAGCTGTAAAATAAGAAAATCTCTCCCTTAGTGTCAACACAAGACCCAGGGTGTGACATTTGGAAGAGTTTACCTTGTGAAATCATCCATTCATCCCACTACAACGACTTTTAGAAGAAAATGaatatcaacctcttactaaccgagcgcgagggccgtactggggaatattccccggtacggcctgagcaagctcggttagtaagtagtttattatatggcactctgttcctaatagtacaatgcacttccggtggcttgcacttaaaaaatgttcgtcttcttcatccatctttgaaatttcggaaaaaattcaatcttcttagcttctgctggtagtttcaatgtgaagaatgacaattttcacaccttttttttcactgtcttggttacaaattttgaatttgccggctttgctccataacaaaaatacacggattggaccgtttccatggaaacggtccgttctgcaaaatcctgaccgagaaagaaccaatcagagcacaagaatttgcatacgactgggtttgccatataataaattaatttatCTATCTTAGTAACAAAAATATCTTAATACTTTGCTCCACATATTTGAATTGATTTGACTTTAGAAGATATTTGCTTAGTTGACTTTACACTTTATACGCTATTTATTCACGTACCTTTTTGTTCTGTAATGTATTGTTTGTAAAACATTATTTAATACCATAGCTCTCTGTACTTGTTCTTTTTTTTCTTTTATACTCATGTAACTACTGCTCACCTTGACTGGCTTTTGCTAACTGCAAGCAGTGGATATTAATCATGTAATTTACAACAGTGAAATTCTACAATAAACAATCAATCCAAGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5E9H9	Palmitoyl-protein thioesterase ABHD10, mitochondrial OS=Bos taurus OX=9913 GN=ABHD10 PE=2 SV=1
Q6PE15	Palmitoyl-protein thioesterase ABHD10, mitochondrial OS=Mus musculus OX=10090 GN=Abhd10 PE=1 SV=1
Q9NUJ1	Palmitoyl-protein thioesterase ABHD10, mitochondrial OS=Homo sapiens OX=9606 GN=ABHD10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008718 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561 all species →	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073 all species →	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR052382 all species →	Family	Mitochondrial ABHD10 acyl-protein thioesterase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16138 all species →	MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002084 all species →	Biological Process	protein depalmitoylation	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0008474 all species →	Molecular Function	palmitoyl-(protein) hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0169.g83.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.