Detailed information of amic_s0175.g9.t1 in Acropora microphthalma

Genomic Location: sc0000175_pilon:393326...445500
NR annotation: XP_044166029.1, uncharacterized protein LOC114961670 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
Q3UQ28Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000013 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF07534
all species →		TLDTLDDomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051275
all species →		FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR006571
all species →		DomainTLDc domainInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan
IPR038274
all species →		Homologous_superfamilyAtg6/Beclin C-terminal domain superfamilyInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11640
all species →		NEPHRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0005911
all species →		Cellular Componentcell-cell junctionInterproscan
GO:0050839
all species →		Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0175.g9.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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