Detailed information of amic_s0176.g34.t1 in Acropora microphthalma

Genomic Location: sc0000176_pilon:380086...394148
NR annotation: XP_015761905.1, PREDICTED: negative elongation factor A-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BG30Negative elongation factor A OS=Mus musculus OX=10090 GN=Nelfa PE=1 SV=1
Q9H3P2Negative elongation factor A OS=Homo sapiens OX=9606 GN=NELFA PE=1 SV=3
Q86NP2Negative elongation factor A OS=Drosophila melanogaster OX=7227 GN=Nelf-A PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004888 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0176.g34.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR037517
all species →		DomainHepatitis delta antigen (HDAg) domainInterproscan
IPR052828
all species →		FamilyNegative elongation factor A domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13328
all species →		NEGATIVE ELONGATION FACTOR A NELF-AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032021
all species →		Cellular ComponentNELF complexInterproscan
GO:0034244
all species →		Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15179WHSC2, NELFA; negative elongation factor A-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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