Detailed information of amic_s0187.g8.t1 in Acropora microphthalma

Genomic Location: sc0000187_pilon:108321...133475
NR annotation: CAH3174456.1, unnamed protein product [Porites lobata]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A4D6G3C8Cholesterol oxidase OS=Acinetobacter baumannii OX=470 GN=choxAB PE=1 SV=1
P9WMV8Cholesterol oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=choD PE=3 SV=1
P9WMV9Cholesterol oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=choD PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001043 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12697
all species →		Abhydrolase_6Alpha/beta hydrolase familyDomainInterproscan
PF00732
all species →		GMC_oxred_NGMC oxidoreductaseDomainInterproscan
PF05199
all species →		GMC_oxred_CGMC oxidoreductaseDomainInterproscan
PF00890
all species →		FAD_binding_2FAD binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052542
all species →		FamilyCholesterol Oxidase EnzymeInterproscan
IPR000073
all species →		DomainAlpha/beta hydrolase fold-1Interproscan
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR000172
all species →		DomainGlucose-methanol-choline oxidoreductase, N-terminalInterproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR007867
all species →		DomainGlucose-methanol-choline oxidoreductase, C-terminalInterproscan
IPR003953
all species →		DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47470
all species →		CHOLESTEROL OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016614
all species →		Molecular Functionoxidoreductase activity, acting on CH-OH group of donorsInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0187.g8.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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