Detailed information of amic_s0189.g16.t1 in Acropora microphthalma

Genomic Location: sc0000189_pilon:200562...210435
NR annotation: XP_015773828.1, PREDICTED: PR domain zinc finger protein 12-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2AJ77PR domain zinc finger protein 12 OS=Mus musculus OX=10090 GN=Prdm12 PE=2 SV=1
Q9H4Q4PR domain zinc finger protein 12 OS=Homo sapiens OX=9606 GN=PRDM12 PE=1 SV=2
P0C6Y7Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000205 (this species only) · gene tree & orthology
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF21549
all species →		PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001214
all species →		DomainSET domainInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR050331
all species →		FamilyZinc fingerInterproscan
IPR044406
all species →		DomainPRDM12, PR/SET domainInterproscan
IPR046341
all species →		Homologous_superfamilySET domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16515
all species →		PR DOMAIN ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0010468
all species →		Biological Processregulation of gene expressionInterproscan
GO:0022008
all species →		Biological ProcessneurogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24255PRDM12; PR domain zinc finger protein 12EC:2.1.1.-
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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