Detailed information of amic_s0189.g24.t1 in Acropora microphthalma

Genomic Location: sc0000189_pilon:302646...312230
NR annotation: XP_029211747.2, voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X4 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61290Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus musculus OX=10090 GN=Cacna1e PE=1 SV=1
Q07652Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus norvegicus OX=10116 GN=Cacna1e PE=1 SV=1
Q02343Voltage-dependent R-type calcium channel subunit alpha-1E OS=Oryctolagus cuniculus OX=9986 GN=CACNA1E PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000418 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR050599
all species →		FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0007268
all species →		Biological Processchemical synaptic transmissionInterproscan
GO:0008331
all species →		Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0189.g24.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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