Detailed information of amic_s0189.g3.t3 in Acropora microphthalma

Genomic Location: sc0000189_pilon:58497...65595
NR annotation: XP_015775496.1, PREDICTED: laminin subunit alpha-1-like isoform X2 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005596 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00020
all species →		TNFR_c6TNFR/NGFR cysteine-rich regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001368
all species →		DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR052302
all species →		FamilyNeurotrophin receptor-related death domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46605
all species →		TUMOR NECROSIS FACTOR RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005035
all species →		Molecular Functiondeath receptor activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007266
all species →		Biological ProcessRho protein signal transductionInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0015026
all species →		Molecular Functioncoreceptor activityInterproscan
GO:0048406
all species →		Molecular Functionnerve growth factor bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0189.g3.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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