Detailed information of amic_s0191.g1.t1 in Acropora microphthalma

Genomic Location: sc0000191_pilon:1...55617
NR annotation: XP_044174391.1, uncharacterized protein LOC122958021 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5BIM1E3 ubiquitin-protein ligase TRIM45 OS=Bos taurus OX=9913 GN=TRIM45 PE=2 SV=1
Q6PFY8E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 GN=Trim45 PE=1 SV=2
Q99PP7E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus OX=10090 GN=Trim33 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17170DUF51286-bladed beta-propellerRepeatInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan
IPR034464DomainPARP-10, RNA recognition motif 1 and 2Interproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

TOP