Detailed information of amic_s0194.g5.t1 in Acropora microphthalma

Genomic Location: sc0000194_pilon:378873...380508
NR annotation: XP_029181883.2, uncharacterized protein LOC114949708 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P24731Alkaline nuclease OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=AN PE=1 SV=1
P24081Alkaline nuclease OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=ALK-EXO PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000536 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04434
all species →
SWIMSWIM zinc fingerDomainInterproscan
PF09588
all species →
YqaJYqaJ-like viral recombinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011335
all species →
Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR051703
all species →
FamilyNF-kappa-B Signaling RegulatorInterproscan
IPR007527
all species →
DomainZinc finger, SWIM-typeInterproscan
IPR011604
all species →
Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR019080
all species →
DomainYqaJ viral recombinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46609
all species →
EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0194.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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