Detailed information of amic_s0195.g47.t1 in Acropora microphthalma

Genomic Location: sc0000195_pilon:509633...512865
NR annotation: XP_029201077.1, enhancer of split mbeta protein-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q01068Enhancer of split m3 protein OS=Drosophila melanogaster OX=7227 GN=E(spl)m3-HLH PE=1 SV=1
Q01069Enhancer of split mbeta protein OS=Drosophila melanogaster OX=7227 GN=E(spl)mbeta-HLH PE=1 SV=2
Q26263Protein deadpan OS=Drosophila melanogaster OX=7227 GN=dpn PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010073 (this species only)
Transcription factor familybHLH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050370
all species →		FamilyHairy and Enhancer of Split/HEY-relatedInterproscan
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10985
all species →		BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952
all species →		Biological Processanterior/posterior pattern specificationInterproscan
GO:0050767
all species →		Biological Processregulation of neurogenesisInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0195.g47.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP