Detailed information of amic_s0197.g29.t1 in Acropora microphthalma

Genomic Location: sc0000197_pilon:309696...336070
NR annotation: XP_029194913.2, uncharacterized protein LOC114960662 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8JZM8Mucin-4 OS=Mus musculus OX=10090 GN=Muc4 PE=2 SV=2
Q99102Mucin-4 OS=Homo sapiens OX=9606 GN=MUC4 PE=1 SV=5
Q63661Mucin-4 OS=Rattus norvegicus OX=10116 GN=Muc4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000210 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan
PF07645
all species →
EGF_CACalcium-binding EGF domainDomainInterproscan
PF01390
all species →
SEASEA domainFamilyInterproscan
PF05345
all species →
He_PIGPutative Ig domainDomainInterproscan
PF12662
all species →
cEGFComplement Clr-like EGF-likeDomainInterproscan
PF12661
all species →
hEGFHuman growth factor-like EGFDomainInterproscan
PF06119
all species →
NIDONidogen-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000082
all species →
DomainSEA domainInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR003886
all species →
DomainNIDO domainInterproscan
IPR049883
all species →
DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR036364
all species →
Homologous_superfamilySEA domain superfamilyInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR026823
all species →
DomainComplement Clr-like EGF domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR005533
all species →
DomainAMOP domainInterproscan
IPR013032
all species →
Conserved_siteEGF-like, conserved siteInterproscan
IPR050751
all species →
FamilyExtracellular matrix structural proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034
all species →
EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0007160
all species →
Biological Processcell-matrix adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0197.g29.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP