Detailed information of amic_s0197.g9.t1 in Acropora microphthalma

Genomic Location: sc0000197_pilon:99385...103515
NR annotation: XP_029194890.2, endoribonuclease YbeY-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58557Endoribonuclease YbeY OS=Homo sapiens OX=9606 GN=YBEY PE=1 SV=2
Q8CAV0Endoribonuclease YbeY OS=Mus musculus OX=10090 GN=Ybey PE=1 SV=1
A7ZCA7Endoribonuclease YbeY OS=Campylobacter concisus (strain 13826) OX=360104 GN=ybeY PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008183 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02130
all species →		YbeYEndoribonuclease YbeYFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002036
all species →		FamilyEndoribonuclease YbeYInterproscan
IPR020549
all species →		Conserved_siteEndoribonuclease YbeY, conserved siteInterproscan
IPR023091
all species →		Homologous_superfamilyMetalloprotease catalytic domain superfamily, predictedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46986
all species →		ENDORIBONUCLEASE YBEY, CHLOROPLASTICInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0197.g9.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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