Gene detail

Detailed information of amic_s0198.g29.t1 in Acropora microphthalma

Genomic Location: sc0000198_pilon:350742...367465
NR annotation: XP_044180791.1, N-alpha-acetyltransferase 15, NatA auxiliary subunit-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0198.g29.t1

ATGCCGACTACTCTACCACCCAAAGAGAACGCTTTATTCAAGAGAATCTTGAAATGCTACGAACACAAGCAATACAAGAATGGTCTGAAGTTTGCCAAGCAGATCCTTTCAAATCCGAAGTTTTCGGAGCATGGTGAAACTCTGGCTATGAAGGGACTGACGCTGAACTGTCTTGGAAGAAAGGAAGAGGCGTACGAGATTGTGCGAAGAGGACTCCGAAATGATCTCAAGAGTCATGTTTGTTGGCATGTTTATGGCTTGTTGCAGAGATCAGACAAAAAATATGACGAAGCCATCAAGTGTTATAGAAATGCTCTAAAATGGGACAAGGAAAATATTCAAATTTTGAGAGATTTGTCATTGCTCCAAATTCAGATGCGTGATCTTGAGGGATTCAGGGAAACTAGGTACCAGTTACTGAGGTTGCGACCTGGACAAAGAGCATCTTGGATTGGTTATGCCATTTCCTACCATCTGCTTAAAGATTATGACATGGCTTTCACCATTTTGGAAGATTTTCGGAAAACACAACATATTTCTATGTCAAAAGTTGATGCTGAGCATGGTGAACTGCTACTATACCAGAACATGGTGCTGCGAGAAGCAGGAAGGACAAGCAAAGCTTTAGAGCACTTGATAGAATTTGCATCCTTAATGCATGACAAACTTGTTGTGCGTGAAATCAAAGGATCTTTGCATCTTGACCTGTATCACTTTAAAGAAGCAGAAAAGATTTTCAAAGAGTTGCTGAGGAGAAACCCAGAAAACAGCTGGTACTACCAGGAATTAGAGAAGTGTTTACAACTGAGTAACCCTGATGATCGTTACAACTTGTACATGCAGTATACTGAGATGTTCCCCAAAGCACAGGCACCTCGGCGAATACCACTTTCATTTACAACAGGTGAAATCTTCGCCACACTGGTTGGCAATTATATGAGACTTGCCATTTGTAAAGGAGTGCCTCCACTGTTTAACAATATCAGAAATTTGTATATTGATAAGGAAAAAATAAAGATTGTGGAAGATGTTGCAATTGGGTTCCTTGACAGTATAACATCTTTTGGAACTTTAACAGGGAAAGTTGGTGATGTTGAACCTCCAACGGCCATTCTGTGGGTATACCATTTTCTTGCTCAGCATTTTGACTATTTACGTGATTGCAAGAGAGCTATGGAATTCATTGACAAGGCATTGGATCATACCCCAACTCTAATTGAAGCTTATATGGTCAAAGCAAGAATTTACAAGCATGGTGGTGATATGGAGAAAGCAGCTGATTGCATGGATGAGGCAAGGTCCCTCGACACTGCTGATAGATATGTGAATTGCAAATGTGCAAAATACCAGCTAAGGGCCAATCAAGTTCAGAAAGCTGAGGAAACTTGTGGGTTGTTTACAAGAGTTTCTGATCCACTAGATCAAGCTCTCAGATTTCTTCGTCCATTACAGAACCTGGCGTCGAACAGGATAGAAACCCACTTGCTGGCGTATGAAGTTTTTTCACGGAAAAGTAAACGATTGCTGATGCTTCAGTCCGTAAAGCGGGCTCATACCATCGATCCAAATCATCCCACGCTTCATGAACATCTCGTCAAGCTTGCAGTTAAAGTATCGGAGTCCACTGACATGAAGGAATCAATTTCTGCCGTTTTTGAACGTGAACTCAAAACTCTACTTGGAAGTAAAGATATGAAACAGTTTAACGCGGACTTCTTGGAAGAAAATTCACGTTCTTTGCTGCACAGACTTTCAGGTTGCAGGATGCTGTGTCTATTGGATCCAAGGAAGGTCGATGATGCGCTGGCGCTGATCACTGATCTGGCGGACAATCTTGAAGACAGAACGTTAGAGAACTGCACTTTGATCTACAACACTCTATTGGAAGGAACCTTTGGAGAATGCAGTGATTTAACAAGAGAATATTTTCTCAAATGCCGCAGCTTATTTCCCCTGGCCTCAGTGTTTTCAAAGTATGATGGGGCTACAGGTAGCTTGAATGGCGTGGACGCAACGCTATCTGATCGAAGTGAACCGTTTTGTGATGGAGTCGTGTGA

Transcript

amic_s0198.g29.t1

GGTCGCCATTTTCGCAGTTTCCACGAGGCCACGGGAAATTTAACCTTTTGGTGGTAGAGGGTTGCCCTTTAGTAGTTGACCACCATGCCGACTACTCTACCACCCAAAGAGAACGCTTTATTCAAGAGAATCTTGAAATGCTACGAACACAAGCAATACAAGAATGGTCTGAAGTTTGCCAAGCAGATCCTTTCAAATCCGAAGTTTTCGGAGCATGGTGAAACTCTGGCTATGAAGGGACTGACGCTGAACTGTCTTGGAAGAAAGGAAGAGGCGTACGAGATTGTGCGAAGAGGACTCCGAAATGATCTCAAGAGTCATGTTTGTTGGCATGTTTATGGCTTGTTGCAGAGATCAGACAAAAAATATGACGAAGCCATCAAGTGTTATAGAAATGCTCTAAAATGGGACAAGGAAAATATTCAAATTTTGAGAGATTTGTCATTGCTCCAAATTCAGATGCGTGATCTTGAGGGATTCAGGGAAACTAGGTACCAGTTACTGAGGTTGCGACCTGGACAAAGAGCATCTTGGATTGGTTATGCCATTTCCTACCATCTGCTTAAAGATTATGACATGGCTTTCACCATTTTGGAAGATTTTCGGAAAACACAACATATTTCTATGTCAAAAGTTGATGCTGAGCATGGTGAACTGCTACTATACCAGAACATGGTGCTGCGAGAAGCAGGAAGGACAAGCAAAGCTTTAGAGCACTTGATAGAATTTGCATCCTTAATGCATGACAAACTTGTTGTGCGTGAAATCAAAGGATCTTTGCATCTTGACCTGTATCACTTTAAAGAAGCAGAAAAGATTTTCAAAGAGTTGCTGAGGAGAAACCCAGAAAACAGCTGGTACTACCAGGAATTAGAGAAGTGTTTACAACTGAGTAACCCTGATGATCGTTACAACTTGTACATGCAGTATACTGAGATGTTCCCCAAAGCACAGGCACCTCGGCGAATACCACTTTCATTTACAACAGGTGAAATCTTCGCCACACTGGTTGGCAATTATATGAGACTTGCCATTTGTAAAGGAGTGCCTCCACTGTTTAACAATATCAGAAATTTGTATATTGATAAGGAAAAAATAAAGATTGTGGAAGATGTTGCAATTGGGTTCCTTGACAGTATAACATCTTTTGGAACTTTAACAGGGAAAGTTGGTGATGTTGAACCTCCAACGGCCATTCTGTGGGTATACCATTTTCTTGCTCAGCATTTTGACTATTTACGTGATTGCAAGAGAGCTATGGAATTCATTGACAAGGCATTGGATCATACCCCAACTCTAATTGAAGCTTATATGGTCAAAGCAAGAATTTACAAGCATGGTGGTGATATGGAGAAAGCAGCTGATTGCATGGATGAGGCAAGGTCCCTCGACACTGCTGATAGATATGTGAATTGCAAATGTGCAAAATACCAGCTAAGGGCCAATCAAGTTCAGAAAGCTGAGGAAACTTGTGGGTTGTTTACAAGAGTTTCTGATCCACTAGATCAAGCTCTCAGATTTCTTCGTCCATTACAGAACCTGGCGTCGAACAGGATAGAAACCCACTTGCTGGCGTATGAAGTTTTTTCACGGAAAAGTAAACGATTGCTGATGCTTCAGTCCGTAAAGCGGGCTCATACCATCGATCCAAATCATCCCACGCTTCATGAACATCTCGTCAAGCTTGCAGTTAAAGTATCGGAGTCCACTGACATGAAGGAATCAATTTCTGCCGTTTTTGAACGTGAACTCAAAACTCTACTTGGAAGTAAAGATATGAAACAGTTTAACGCGGACTTCTTGGAAGAAAATTCACGTTCTTTGCTGCACAGACTTTCAGGTTGCAGGATGCTGTGTCTATTGGATCCAAGGAAGGTCGATGATGCGCTGGCGCTGATCACTGATCTGGCGGACAATCTTGAAGACAGAACGTTAGAGAACTGCACTTTGATCTACAACACTCTATTGGAAGGAACCTTTGGAGAATGCAGTGATTTAACAAGAGAATATTTTCTCAAATGCCGCAGCTTATTTCCCCTGGCCTCAGTGTTTTCAAAGTATGATGGGGCTACAGGTAGCTTGAATGGCGTGGACGCAACGCTATCTGATCGAAGTGAACCGTTTTGTGATGGAGTCGTGTGAACGACGAGAAATTTACTGGATCCTCCGGTTTTATGGCATTTTGGAGAATTCCCATTTTATTTCTTGGAGAATTTTGGAGTATGGACACAAAGCAAGCAGGAATAACGCGCTCCATTTTGGGAAAATATCCTGAGCAGTTTTAAACAGTTGGGAAGATAACTCAGCTTGCCATTGTCACGAGGAAAAGAAGGGAAATGGATTCCGAACGTTTTTTGCGAGTCTCCTGCTTTAGCATTTTTGACTTATTAATTGACAGTGTTAGAATCCGAATTTAAGGTCTTATTCGGAAACCCATCCTAGATTTTCAACGCTTAAAATTCAGCGAACATGAAGAAAATTGTTCAGCGTCGGGCAAAAGACGCCTTTCAAACCAATCAAAATTCATTGCATTTTGAAATAAATCACGAGACCAATA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R4J9	N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Pongo abelii OX=9601 GN=NAA15 PE=2 SV=1
Q9BXJ9	N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Homo sapiens OX=9606 GN=NAA15 PE=1 SV=1
Q80UM3	N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005574 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF12569 all species →	NatA_aux_su	N-terminal acetyltransferase A, auxiliary subunit	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR021183 all species →	Family	N-terminal acetyltransferase A, auxiliary subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22767 all species →	N-TERMINAL ACETYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017196 all species →	Biological Process	N-terminal peptidyl-methionine acetylation	Interproscan
GO:0031415 all species →	Cellular Component	NatA complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20792	NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.