Detailed information of amic_s0199.g46.t1 in Acropora microphthalma

Genomic Location: sc0000199_pilon:541869...555191
NR annotation: XP_044182317.1, LOW QUALITY PROTEIN: laminin subunit beta-1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P07942Laminin subunit beta-1 OS=Homo sapiens OX=9606 GN=LAMB1 PE=1 SV=2
P02469Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3
P55268Laminin subunit beta-2 OS=Homo sapiens OX=9606 GN=LAMB2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003322 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053
all species →		Laminin_EGFLaminin EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049
all species →		DomainLaminin-type EGF domainInterproscan
IPR050440
all species →		FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →		NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009887
all species →		Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →		Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05636LAMB1; laminin, beta 1-Toxoplasmosisko05145deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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