Gene detail

Detailed information of amic_s0200.g2.t1 in Acropora microphthalma

Genomic Location: sc0000200_pilon:21046...27842
NR annotation: XP_044177101.1, proteasome subunit beta type-7-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P70195	Proteasome subunit beta type-7 OS=Mus musculus OX=10090 GN=Psmb7 PE=1 SV=1
Q9JHW0	Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1
Q99436	Proteasome subunit beta type-7 OS=Homo sapiens OX=9606 GN=PSMB7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003206 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12465 all species →	Pr_beta_C	Proteasome beta subunits C terminal	Family	Interproscan
PF00227 all species →	Proteasome	Proteasome subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR024689 all species →	Domain	Proteasome beta subunit, C-terminal	Interproscan
IPR001353 all species →	Family	Proteasome, subunit alpha/beta	Interproscan

PANTHER

No PANTHER signature was detected for amic_s0200.g2.t1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0005839 all species →	Cellular Component	proteasome core complex	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0200.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.