Gene detail

Detailed information of amic_s0200.g4.t1 in Acropora microphthalma

Genomic Location: sc0000200_pilon:40236...63060
NR annotation: XP_029198512.2, uncharacterized protein C05D11.1-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0200.g4.t1

ATGGCGGAACATTTTGATTGCTTGTCTTCTTTTCTTGTCTTGGATTCCATTCCTGTGGAAAAATATCGTTCTAAAAGAACGGGTATCAATTTTTGTTTTGCTAAAGTTCCTGGACCTCTTGTTAATGGCTTTCTTTGTCTTGCCACAGAAGCCCATGACGATGATGGCTTACCACACACCTTGGAACACCTGGTGTTTATGGGAAGCGAAAATTATCCTTACAAGGGTCTTCTAGATTTGCTTGCCAACAGATGTTTGGCCCAAGGAACTAATGCATGGACAGCAACTGATCATACAGCTTATACAATGGAAACTGCTGGCAGTGAAGGTTTTCTAAACCTATTACCAATTTACCTTGACCATGTGCTATATCCAACTCTTACGGAATCTGCATACATTACTGAAGTTCATCACGTGAATGGGGAGGGAGAGGACGCAGGAGTAGTCTACTGCGAGATGCAAGGAAGAGAGAATACGGAATCCTCGAGGACATTCTTGAATTTTTCCCGTGAGATGTATCCTGGTCACTGCGGCTATAAGTCAGAAACTGGTGGAATTATGGAAAATTTACGATCAACTTGTAGTCACACCAAGGTTTGTAATTACCATCAGCAGTTTTATCGGCCAGAAAATTTGTGTGTCATCATCACTGGACAAATTGATCCAAAGAAAGTGTTTAAAACTGTCAAGTCATTTGAGGACAAAATACTCACTAAGAAAGCTCTGCCGCCTTATGAAAGACCTTGGCAAAGTTCAGTCCCACCCGTTTCTCAAAATGTCGAGAAAGTTGTCAAGTTCCCAACAGAGGACGAGGAATCGGGCTCTATTCTTTTTGGATTTCGTGGCCCGCCCGGCATGGATCGTTACAGCGTGTCTGCTGTTTCAGTTATGCTGGACTACCTATCAGATACTTCCATTGCGCCGTTGCAGCGAGAATTGGTGGAAATTCAAGACCCCTTCTGCAGTGACATTTCGTGCGACGTCTTAGAATTCTCAGAGACCTCTCTGCTTCTGAAAGCTGCTAATGTTCCATTTGAAAAGTTGTCTGCTACAAAGGACAAGATCAAGGAAGTCTTGGGAAATATTGCAGATGGGAAAGAAGCCATCGACATGAAGCGTATGAGTGTGGTAATTCACCGCAAAATCTTAGAGACGAAGGACAAGTTTGAGAAAAATCCACATGATACTTTTGCTGATATCATTATTGGTGATTTTTTGTATTCATCGAAACCAGGAGAACTTCAGGCAAGAGCTAACGTAATCCAAGATCTGGAGAAACTTCAGAATGAGCCAGTTAACTTCTGGGTCAGTTGTTTGAACAAGTACTTTGTATTGTCTCCAAGTGTTGTGATTGTTGGTCAACCTAGTGCCAAGCTAATGACGAAGATGTCTGAAACGGAGAAGAAAAGAGTTGCCGAGCAAAGAACAGCACTGGGTGAAGAAGGGCTGAAAATCAAACGACAGAGACTTGATAAGGCGACACAAGACAACGAGGTTGAACCTCCTGCAGAGATAGTCACCAGTCTTCCTGTGCCTTCGACATCCAGTATCAGTTTTCATCCAATCAAAATGTTCAGCAACAGACGGCAAGATGGCTGCAGTCAAACGGAACTCGAAGCAGTCAAATTTCCCGTGACAGAGATTCCCTACGCGTTTCAACTTGATCACGTGTCAACGTTATTCGTGAAGCTTTCTGTATTGTTAGACACAGCAGTTGTTCCCGAGGAGCTGAAACCTTACCTTTGTCTTTATCTTGAAGTGCTGTTTGAATCTCCAATACTAAGAGATGGAGTTCTTGTGCCGTATGATCAAGTTGTAGCGCAGCTGGCAGGAGATACTCTTGACAAGGTATCTTCCTTGGGTCTAAAGGGGAAAAGGTTTATGCCGGAGGAGTTTTCGCAGCTAGCTTGTGTGTCCCTCAAGCTTGAAGTTGAAAAGTACGAGAAGGGAGTTCATTGGTTGCACGAACTGCTCTATAAAACTCAGTTCACGAAGGACAGACTGGAAATTGTCGGTAGAAAGATGATGAACGACGTGGCGAGGATGAAACGACAGGGAAGAGGTGTAGCCAGAACTCTTATTAGAGACATTGCTTTCATTAAAGACAGCAACATGTTTTCAGCCAATATGGTGCGGCAGTATAGTTTTCTAAACAAACTTCTTAGCGACTTGGAGACCAATGCAGTTGAGGTTATTGGAAAAGTTGAGAAGCTACGTTCACTTTTAACGCACCCGTCAAATTTACGAGTCCATGTGGTCGCCGACGTGAACAGATTGCCAGACAATCCTCATGTGCTATGGAAAACCAAGCTTCTTCCCAACAGCTCACTCGAAATACCCAAGAACCTTCCTCCCGTTCGGAGAGTCAGTTCCTTTCTGGCTGCCAATCCTGTGCATGGTAAAATAGCGGGTGTTGGTTCAGTGGAATCTTCCTTTCTCTACCAAATTACCCGCTGTGTTGAAAGCTTTGATCATCCTGATCTCGCTGCCATTATGGTCTTCCTAGAGTGTCTAACCACGCTTGAGGGTCCAATATGGCGCCAAGTTCGAGGCCTGGGATTGTCATACGGTTATGCAATGCGCGTTAACCCAGAGAATGGCCTTCTTTACCTTCAACTTATCAAGTCCACGCATTTGGTGAAAGCCTACAAGAAAACTCAGGAAATTGTAAATGGTCATCTGTCAGGTGAAATGGAATTTGACGCTGGTGATCTGGAATCGGCTATCAGCAGCGTGATATTTGAGATCATTGAGCGAGAGAAGAGTGTCTCCTCTGCCGCATCACAGAGTTTAGTTTCACAGTTCAAAAATGTCTCTCCTGACTACAACAAGACTTTACTGGACAAGATATCTCAAGTGACCTTAGCAGACCTGGTCAGGGTCGGGCGAGAGTATGTAGCACCTTTGTTTGATCCCGCACGATCTTCTTTTGCGGTTTGCTGTCATCCGTCGAAGGTGGACGAGATAAGAGAAGAATTTGGCAGTATAAACAAGCCATTGAAAGTTGTCAAATCTTTGGAAGAAGAATTTACGTGGCCCTGTTAG

Transcript

amic_s0200.g4.t1

taatgacgtcaaggaggttgttgcgtcataacccagggtcacgtggtacaaatcaaccaatcagaaaatcggaattcgtacagtgtatgaaagttgaataacaatTCATGTTAAAGTTTACgggagtttaagaagcagcgcaggctatggcagataaaaacgtcactgatataaaaataaacatttgcccaattataactatttggccattattgctttttgtttgcattctatatagttgacaaactagtctaaaaatggactgataggggcaccctatgattaaatatagagaatgaaagatttacttttggcggtccaccttgtcgttataacaatgtcacgttgtttaaagggcgtgtcgcacgtgtagcgcaattatttttccttatttatccaataggaccattcttttctggTgttgtagttgccgttcaatgccgtcttcgttgcctaaactcccATAGTCCGCGCACTGCGGTTGCGGGCCACTTGAATACCACTTGGGAGTCGTCTGACCAGAGTTGGTGTGACGGCAATCTTGTGGCAGAGTGCAAAAAGCCTGAAGCATTAGAAAGTGGGCTGGAAGCGCCTAGGAAGCAAGACTCCCTTTCCCCTCTTTTATTCTTTTTCCGGCTTTATTTTACTTCTATTGGTTTACTGGAAACAGCAAGCTTTCTTGGTTGCCTGGGCGCTAGGGTTTGTCACGCGGCCATGCGTGACAATGCTGTGTGAAATCGTCCCAGGTTGACTCCGTCAACATGGCGGAACATTTTGATTGCTTGTCTTCTTTTCTTGTCTTGGATTCCATTCCTGTGGAAAAATATCGTTCTAAAAGAACGGGTATCAATTTTTGTTTTGCTAAAGTTCCTGGACCTCTTGTTAATGGCTTTCTTTGTCTTGCCACAGAAGCCCATGACGATGATGGCTTACCACACACCTTGGAACACCTGGTGTTTATGGGAAGCGAAAATTATCCTTACAAGGGTCTTCTAGATTTGCTTGCCAACAGATGTTTGGCCCAAGGAACTAATGCATGGACAGCAACTGATCATACAGCTTATACAATGGAAACTGCTGGCAGTGAAGGTTTTCTAAACCTATTACCAATTTACCTTGACCATGTGCTATATCCAACTCTTACGGAATCTGCATACATTACTGAAGTTCATCACGTGAATGGGGAGGGAGAGGACGCAGGAGTAGTCTACTGCGAGATGCAAGGAAGAGAGAATACGGAATCCTCGAGGACATTCTTGAATTTTTCCCGTGAGATGTATCCTGGTCACTGCGGCTATAAGTCAGAAACTGGTGGAATTATGGAAAATTTACGATCAACTTGTAGTCACACCAAGGTTTGTAATTACCATCAGCAGTTTTATCGGCCAGAAAATTTGTGTGTCATCATCACTGGACAAATTGATCCAAAGAAAGTGTTTAAAACTGTCAAGTCATTTGAGGACAAAATACTCACTAAGAAAGCTCTGCCGCCTTATGAAAGACCTTGGCAAAGTTCAGTCCCACCCGTTTCTCAAAATGTCGAGAAAGTTGTCAAGTTCCCAACAGAGGACGAGGAATCGGGCTCTATTCTTTTTGGATTTCGTGGCCCGCCCGGCATGGATCGTTACAGCGTGTCTGCTGTTTCAGTTATGCTGGACTACCTATCAGATACTTCCATTGCGCCGTTGCAGCGAGAATTGGTGGAAATTCAAGACCCCTTCTGCAGTGACATTTCGTGCGACGTCTTAGAATTCTCAGAGACCTCTCTGCTTCTGAAAGCTGCTAATGTTCCATTTGAAAAGTTGTCTGCTACAAAGGACAAGATCAAGGAAGTCTTGGGAAATATTGCAGATGGGAAAGAAGCCATCGACATGAAGCGTATGAGTGTGGTAATTCACCGCAAAATCTTAGAGACGAAGGACAAGTTTGAGAAAAATCCACATGATACTTTTGCTGATATCATTATTGGTGATTTTTTGTATTCATCGAAACCAGGAGAACTTCAGGCAAGAGCTAACGTAATCCAAGATCTGGAGAAACTTCAGAATGAGCCAGTTAACTTCTGGGTCAGTTGTTTGAACAAGTACTTTGTATTGTCTCCAAGTGTTGTGATTGTTGGTCAACCTAGTGCCAAGCTAATGACGAAGATGTCTGAAACGGAGAAGAAAAGAGTTGCCGAGCAAAGAACAGCACTGGGTGAAGAAGGGCTGAAAATCAAACGACAGAGACTTGATAAGGCGACACAAGACAACGAGGTTGAACCTCCTGCAGAGATAGTCACCAGTCTTCCTGTGCCTTCGACATCCAGTATCAGTTTTCATCCAATCAAAATGTTCAGCAACAGACGGCAAGATGGCTGCAGTCAAACGGAACTCGAAGCAGTCAAATTTCCCGTGACAGAGATTCCCTACGCGTTTCAACTTGATCACGTGTCAACGTTATTCGTGAAGCTTTCTGTATTGTTAGACACAGCAGTTGTTCCCGAGGAGCTGAAACCTTACCTTTGTCTTTATCTTGAAGTGCTGTTTGAATCTCCAATACTAAGAGATGGAGTTCTTGTGCCGTATGATCAAGTTGTAGCGCAGCTGGCAGGAGATACTCTTGACAAGGTATCTTCCTTGGGTCTAAAGGGGAAAAGGTTTATGCCGGAGGAGTTTTCGCAGCTAGCTTGTGTGTCCCTCAAGCTTGAAGTTGAAAAGTACGAGAAGGGAGTTCATTGGTTGCACGAACTGCTCTATAAAACTCAGTTCACGAAGGACAGACTGGAAATTGTCGGTAGAAAGATGATGAACGACGTGGCGAGGATGAAACGACAGGGAAGAGGTGTAGCCAGAACTCTTATTAGAGACATTGCTTTCATTAAAGACAGCAACATGTTTTCAGCCAATATGGTGCGGCAGTATAGTTTTCTAAACAAACTTCTTAGCGACTTGGAGACCAATGCAGTTGAGGTTATTGGAAAAGTTGAGAAGCTACGTTCACTTTTAACGCACCCGTCAAATTTACGAGTCCATGTGGTCGCCGACGTGAACAGATTGCCAGACAATCCTCATGTGCTATGGAAAACCAAGCTTCTTCCCAACAGCTCACTCGAAATACCCAAGAACCTTCCTCCCGTTCGGAGAGTCAGTTCCTTTCTGGCTGCCAATCCTGTGCATGGTAAAATAGCGGGTGTTGGTTCAGTGGAATCTTCCTTTCTCTACCAAATTACCCGCTGTGTTGAAAGCTTTGATCATCCTGATCTCGCTGCCATTATGGTCTTCCTAGAGTGTCTAACCACGCTTGAGGGTCCAATATGGCGCCAAGTTCGAGGCCTGGGATTGTCATACGGTTATGCAATGCGCGTTAACCCAGAGAATGGCCTTCTTTACCTTCAACTTATCAAGTCCACGCATTTGGTGAAAGCCTACAAGAAAACTCAGGAAATTGTAAATGGTCATCTGTCAGGTGAAATGGAATTTGACGCTGGTGATCTGGAATCGGCTATCAGCAGCGTGATATTTGAGATCATTGAGCGAGAGAAGAGTGTCTCCTCTGCCGCATCACAGAGTTTAGTTTCACAGTTCAAAAATGTCTCTCCTGACTACAACAAGACTTTACTGGACAAGATATCTCAAGTGACCTTAGCAGACCTGGTCAGGGTCGGGCGAGAGTATGTAGCACCTTTGTTTGATCCCGCACGATCTTCTTTTGCGGTTTGCTGTCATCCGTCGAAGGTGGACGAGATAAGAGAAGAATTTGGCAGTATAAACAAGCCATTGAAAGTTGTCAAATCTTTGGAAGAAGAATTTACGTGGCCCTGTTAGACAACTGCCGCTCCTGTTGTCTGTACCAGAGACCTCACGCAATAGGGACCTCACGCAATTGGAACCTCGCGGAATAGGAATCTTACACAATAGGGGCCTCACGCAAAGacgacggcgaccgtaacgaggacgtgactcgaaacacaaattcgcattatttttgacagaaaagaattgtttcaagtcattcgggatatgaaatgagagctatctaagcatgaacggattagaaatttCGACTAGGAGATTTAAGTGACCTTTTAGCATCGTTTGCTGACGTCCTCCATTGGACTTAAAATTTCACGTCGTTGTGTAAGGTCCCTATTACCACGCAATGCACAGTCACGCAATACAAGGATACTGTCACGTTGTTCCTTACTTGTCAGAAAGAATGAACACTTTTTTCCTCTCCGAAATAAAACCACAGAAAGCAGTATCATTTTTCCCAGGGAGAATAAGCTAGAATTTTTTTAATGCAAGGAGGAGGTACTTGCTTTCCTGCTTCGCATTCAATGCCTTCTATTCTGACTATTCTCTTAATGGGGAAAACAAAACAAAACACTTAACTAGTATTTAATTAAGGTAGAACAATTTGTTACTGATAATGGAAAAATGGTTATCAGGAAAACGAAATAATtatgtatgataaaatacatgaattttttgtattagaccagcggattgaaattaatgtgtctgttccttgcaattttttagcgctatttaagcactagcgaggaggcatgcctggacggggattcgagccctgacctatgggatgctggtgcagtgctccaccagttgagctattaggccatgtgggagctggtcgCCGTTCAGGCCTGCTTCCTCACCACTGCTTAAGTGGCGCTAaatagggagtttaagatctacgacgcgacagtagcgaaaacgtcgctcaaaattgcaagttcaagtttttcaatctatttcgccattatgtcagtttgtttattaacttttgaaagctagcggaactacccaggaactgaatttagaggtgcggtgtcaacgctaggaaagaatattcaaatttgcgcctgagtgttcacgttctctgtgaaacttgagaaatggtcatttcacgtcgcagatttgccgatacttgaaagaaatgcacggaattaaaaaaatgcacgtgaagggcgtgcaaaacttttgtttttgtcaattaagtatgcaaattttatggcgtcgtcgctgcagtcgcgtcgttgatcttaaactccctaATATCTGCGAGGAACATAACGCATTTATCAGGAAAACCTAAATTAATACTAATCTAAATTTATTAATCTAGGTAGCCTTATCTTTATTTAGATATCCTTTTAAATTTGAAATCAGGGTGGATTTGTTGATCAAACCGTAGTTCAATTTTGTCTTCGACGAAACACTCTCAGCCAACACTTGAAGAAACTGTACTGAACCCTTGTTACTTAGAGAGTAGCCTGCGTAGCTGACAAGATAGTTCGTGCGTGAGGCAAGATTCCTCCCGAGGTTGGAGTTAGAGCCGAGCCGTGGGAAGAGTGGTGACCAGTCCAAGTTGGATCTTCGCCGCTCGTCACCAGTCTTCTCTCGGTTTGGACTAACCCTAATCCTTGGAAAAATTTTGCCTCACGCGCGACCTTTTACATAGTTAGTAGAGCTACTAACTATGTCTTTTACCGCTATCTACGCAGGCCACTTAGTGAGCGCATCGCTTGTGTCATAAACAAATACAGCAGCCACCAGAGCTGATGCAGTTCAAGTTTATAGTGGACAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P48053	Uncharacterized protein C05D11.1 OS=Caenorhabditis elegans OX=6239 GN=C05D11.1 PE=4 SV=2
Q10068	Uncharacterized protein C3H1.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC3H1.02c PE=4 SV=1
Q12496	Uncharacterized protein YOL098C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL098C PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004154 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00675 all species →	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF05193 all species →	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011249 all species →	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR011765 all species →	Domain	Peptidase M16, N-terminal	Interproscan
IPR007863 all species →	Domain	Peptidase M16, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43016 all species →	PRESEQUENCE PROTEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0200.g4.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.