Gene detail

Detailed information of amic_s0201.g2.t1 in Acropora microphthalma

Genomic Location: sc0000201_pilon:12666...26807
NR annotation: XP_044179120.1, peptidyl-prolyl cis-trans isomerase G-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0201.g2.t1

ATGGCTGTTCCCAAGGCAAAAGGTTATCGTCCCAGGTGCTTCTTCGATGTCGAAATCAGTAACTCTCCAGCTGGTAGGATTATCTTTGAGCTGTTTGCTGACATTTGTCCCACTACCTGTGAGAATTTTCGAGCGCTTTGTACAGGAGAAAAAGGCTTGAGCAAAGATTCAGGAAAAGCTCTGCATTATAAAGGGGCACCCTTCCACCGTGTTATTAAAGATTTTATGATTCAAGGAGGAGATTTCACCAAAGGCAATGGAACAGGAGGCGAGTCTATTTATGGAGGGACTTTCAATGATGAAGGCTTTGACATTGATCACGAGCAACCAATGTTGTTGTCAATGGCTAACAGGGGACCCAACACCAATGGCTCTCAGTTTTTCATAACAACTCAACCAACCCCTCATCTCAATGGAGTGCATGTAGTTTTTGGCCATGTCTTACAAGGTCAGGAAGTGGTGACGCAGATTGAGAATCAAGTAATTGATGAGAAAAGTCGACCTATCAATGACGTCAAAGTTAGCAACTGCGGTGAACTGATTCCAAAAGCCAAGGCTATAGGAACAGgaaagaaagctgaaaaaaagaaagcaaagaGGAAGCATGACTCTGATTCCAGTAGCTCCGACGACTCGAGTTCAAGCTCAGATGAGGAATCACAAAGCGATTCTTCGTCCGACGAAGCCACGAAAAGAAAACGATCAAAGAAGAAAAAGAAGCTGAAAAAACAGAATAAAATTGCTAAGAGGAAGGAGAAAAAGAAAGCCAAGAAAAAGGCAAAAAAAGCGGCTACCGATAACAGCGATGAAGGCGACAAAGAAGAGATGAGTACTGAGGCGTTTAGTACAGTCGCTGCAGAAGAGGTCCCGGATGTACCCAACAACTCTTTCCTGTTCAGGAGAAGTCGCACCCCGTCCCCTGTGAGGGAAAAAAGGCTCCAAGAAGAAAAGAATAGAGAAAAGAAAAGCAAGTCACCACCAGGTTACAAAGCAAAAACTGATGACAAGCCAAGGGTTTCTAAGTCTGGGAGAATTCTACGAGGCCGAGGAAATATGCGATACCGTACACCTCCACCGTCGTATTTTTCAAATGAAACGCGAAGCGTTACGGACCGCCATACTCCACCACGACGTGCCAATAGACGTTCAAGGTCACCTCGAAGACGCAGTAGATCACCACGCGCGCGGTCAAAGTCGCCTCGCAGAGAAACAAAAAGCCCGTCGTCTCCAAGTAAGCTTCCAGCGTCCTCACGAAGGCAGCCGAGGGCACCACGAAGATACTCGAAGTCTCCGAGAAGAGACTCTAACTCGCCACGAAAACAGTCGAAGTCACCACAAAGACAATCGAAGTCGCCACGAATACAATCGAAGTCGCCGCAAAGACAGTCAAAGTCGCCGCGAAGAAAGTCGAAGTCGCCACGAAGACAGTCGAAATCACCACGAAGACAGTCGAAATCACCACGAAGACAGTCCAGGTCGCCACGAACGCAGTCGAAGGTGCTACGAAGACAGTCGAAGTCACCACGAAGACAATCAAAGTCAATGCGAAGACATTCGAATCCCCCACGAAGACAGTCGAGGTCACCACAAAGACAGTCGAGGTCACCACGAAGACAGCCGAGGTCACCTCGAAGACATAGTAAGTCTTCGAGAAGTAGATCGAAATCTAAGGAGGCGAATGGACAACATTCTGAGCCACCTCCAATTAATAACGACAAAAAGTCAGGTCAGGAATCAGATTCAGAGATTAGAGGCACAAGATGTGAAAGAGATGAGAAATCGTTGATTGTAGAGGAAAAGGAACGAGAGAAGGACGATGGGGTTGTTTTGTATAGTGACAGTGAAGACGACGAAGGTGATTCAAAACGCGAACGATCAAAGTTCAGTTCCCAGAATTCTGAGGCTCACCGAACAAGAAGAGAAACACGAAGGGGAGAACGGAGCATCAGAAGCAGCAGTAGTAGTGACAGCGAAGAAACAAGGTCCGCCGCGCACAAACAAGCTGGGAAAAGGCAAGTTGACGTACAAGACGCGAGAAATTCAACAAGTCCAGTAACAGGTGAAACAGAAACAGAACCACACCGCAAGTTAGAAGACCATCGTGGAACCGAAAGTCAATCCGCTTCAAGGGCTAACCGCGGAAATGAAACTAAAGATTACAGTTCACGAAGAGAAGGCCATAGAAGCCGTCTGTCGAGTAATCTTGATAACGACGATTCCAGCAGTGACAATTCTGGATACAAAGCAAGGCGAACGCGAGACTCTACTCAGGGTATCCCCCCTGGGAAAAGGGACCCTCGAAGGCGCAGCCGCAGCAAGAGCTCGGAGAGCGACAGAAGTTCTTCCCGTGAGAGGAACCGGAAGTCAAGTCGTTACCATGGTCACCACAGTAGTCGTCATAGTCGGCGTTATGAAAGAAGGACCTCGTTATCAAGATAA

Transcript

amic_s0201.g2.t1

CGACGTACTCATGTTGCAGTGAGATATCCCATGGTTCATTTTGGACAAGAGAATCCAAGATGGCTGTTCCCAAGGCAAAAGGTTATCGTCCCAGGTGCTTCTTCGATGTCGAAATCAGTAACTCTCCAGCTGGTAGGATTATCTTTGAGCTGTTTGCTGACATTTGTCCCACTACCTGTGAGAATTTTCGAGCGCTTTGTACAGGAGAAAAAGGCTTGAGCAAAGATTCAGGAAAAGCTCTGCATTATAAAGGGGCACCCTTCCACCGTGTTATTAAAGATTTTATGATTCAAGGAGGAGATTTCACCAAAGGCAATGGAACAGGAGGCGAGTCTATTTATGGAGGGACTTTCAATGATGAAGGCTTTGACATTGATCACGAGCAACCAATGTTGTTGTCAATGGCTAACAGGGGACCCAACACCAATGGCTCTCAGTTTTTCATAACAACTCAACCAACCCCTCATCTCAATGGAGTGCATGTAGTTTTTGGCCATGTCTTACAAGGTCAGGAAGTGGTGACGCAGATTGAGAATCAAGTAATTGATGAGAAAAGTCGACCTATCAATGACGTCAAAGTTAGCAACTGCGGTGAACTGATTCCAAAAGCCAAGGCTATAGGAACAGgaaagaaagctgaaaaaaagaaagcaaagaGGAAGCATGACTCTGATTCCAGTAGCTCCGACGACTCGAGTTCAAGCTCAGATGAGGAATCACAAAGCGATTCTTCGTCCGACGAAGCCACGAAAAGAAAACGATCAAAGAAGAAAAAGAAGCTGAAAAAACAGAATAAAATTGCTAAGAGGAAGGAGAAAAAGAAAGCCAAGAAAAAGGCAAAAAAAGCGGCTACCGATAACAGCGATGAAGGCGACAAAGAAGAGATGAGTACTGAGGCGTTTAGTACAGTCGCTGCAGAAGAGGTCCCGGATGTACCCAACAACTCTTTCCTGTTCAGGAGAAGTCGCACCCCGTCCCCTGTGAGGGAAAAAAGGCTCCAAGAAGAAAAGAATAGAGAAAAGAAAAGCAAGTCACCACCAGGTTACAAAGCAAAAACTGATGACAAGCCAAGGGTTTCTAAGTCTGGGAGAATTCTACGAGGCCGAGGAAATATGCGATACCGTACACCTCCACCGTCGTATTTTTCAAATGAAACGCGAAGCGTTACGGACCGCCATACTCCACCACGACGTGCCAATAGACGTTCAAGGTCACCTCGAAGACGCAGTAGATCACCACGCGCGCGGTCAAAGTCGCCTCGCAGAGAAACAAAAAGCCCGTCGTCTCCAAGTAAGCTTCCAGCGTCCTCACGAAGGCAGCCGAGGGCACCACGAAGATACTCGAAGTCTCCGAGAAGAGACTCTAACTCGCCACGAAAACAGTCGAAGTCACCACAAAGACAATCGAAGTCGCCACGAATACAATCGAAGTCGCCGCAAAGACAGTCAAAGTCGCCGCGAAGAAAGTCGAAGTCGCCACGAAGACAGTCGAAATCACCACGAAGACAGTCGAAATCACCACGAAGACAGTCCAGGTCGCCACGAACGCAGTCGAAGGTGCTACGAAGACAGTCGAAGTCACCACGAAGACAATCAAAGTCAATGCGAAGACATTCGAATCCCCCACGAAGACAGTCGAGGTCACCACAAAGACAGTCGAGGTCACCACGAAGACAGCCGAGGTCACCTCGAAGACATAGTAAGTCTTCGAGAAGTAGATCGAAATCTAAGGAGGCGAATGGACAACATTCTGAGCCACCTCCAATTAATAACGACAAAAAGTCAGGTCAGGAATCAGATTCAGAGATTAGAGGCACAAGATGTGAAAGAGATGAGAAATCGTTGATTGTAGAGGAAAAGGAACGAGAGAAGGACGATGGGGTTGTTTTGTATAGTGACAGTGAAGACGACGAAGGTGATTCAAAACGCGAACGATCAAAGTTCAGTTCCCAGAATTCTGAGGCTCACCGAACAAGAAGAGAAACACGAAGGGGAGAACGGAGCATCAGAAGCAGCAGTAGTAGTGACAGCGAAGAAACAAGGTCCGCCGCGCACAAACAAGCTGGGAAAAGGCAAGTTGACGTACAAGACGCGAGAAATTCAACAAGTCCAGTAACAGGTGAAACAGAAACAGAACCACACCGCAAGTTAGAAGACCATCGTGGAACCGAAAGTCAATCCGCTTCAAGGGCTAACCGCGGAAATGAAACTAAAGATTACAGTTCACGAAGAGAAGGCCATAGAAGCCGTCTGTCGAGTAATCTTGATAACGACGATTCCAGCAGTGACAATTCTGGATACAAAGCAAGGCGAACGCGAGACTCTACTCAGGGTATCCCCCCTGGGAAAAGGGACCCTCGAAGGCGCAGCCGCAGCAAGAGCTCGGAGAGCGACAGAAGTTCTTCCCGTGAGAGGAACCGGAAGTCAAGTCGTTACCATGGTCACCACAGTAGTCGTCATAGTCGGCGTTATGAAAGAAGGACCTCGTTATCAAGATAAACATCTGTGAAACAAAGTTACAGCTGTTGACTTAAGTGATGTACCCTAAGAAAGACGTGCGCGGATGACTTCGGTAGTTGCTGAAAGACTTTCGGCCGATTATCATGTATCCCACGGGCCCTCGCGCGTATGCTCATCACCAAACATTCTAAAACAGGTTTTAGAACAGCAAAAAACGTTTCTTTTAAAGGGGATACCCTATTTTATATTTAATGACACAGTCATTTTTTTTTTCTTAACTTTGTTCTTATGTTCCTGAAAAAATTGGTGAATCCTATTCTCAAAAGTTATTGGACTTACACTACCCCTGAAGGGAGGTCCTTGGAGTTGTTACAATAAAAAAAGAACGAGAGAGTAGAATCATTGCAGTTTGCGCTGTGACGAAGACAAAACAACAGCAAATTCAACGGGAAGTTGAAAAACAGTGTAAAGCACGCTTTTCTTCTCCAAGATCCACGCAGTGTTTCGTTTGATCGTGTTAGTCAGCTGTAGTAGAGGTTATTATCATTAATAAAAAAAAGTGGATAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2AR02	Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus OX=10090 GN=Ppig PE=1 SV=1
Q13427	Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens OX=9606 GN=PPIG PE=1 SV=2
O55035	Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus OX=10116 GN=Ppig PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000361 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00160 all species →	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029000 all species →	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR002130 all species →	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR020892 all species →	Conserved_site	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11071 all species →	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000413 all species →	Biological Process	protein peptidyl-prolyl isomerization	Interproscan
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09566	PPIG; peptidyl-prolyl isomerase G (cyclophilin G)	EC:5.2.1.8	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.