Gene detail

Detailed information of amic_s0212.g33.t1 in Acropora microphthalma

Genomic Location: sc0000212_pilon:960381...970189
NR annotation: XP_015780474.1, PREDICTED: selenide, water dikinase-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0212.g33.t1

ctcatagaacaacAgtgagcgtgcacaaaccagtgtcattctgggggagaaacttgatacCgttgtcattttaatgtgagGttttgcaaaaatgtttttgtgttaaaagaagtcaggaagacggtagcagtttttgcatttttcaatcaatcagcaaaaagggctctgttaccagcaatgagaatacctgagcaacctctactgctaacaaagagtaagagtaatcgtccaggttataaaatttctacacatttttgctaaaaacaggcagtcaaatctcgtacttgttccagaacctaaagtcccttaaatgaagAATCAAACTAGCCTGAAATTATCTTAACCCAATTTTCAGTATGACTGATAATGTGGTCTCCAATTGGGAAAATATACAAACTAATTTCCACTCTTTTCACTCAAGGATTGTTTGTCACTGTATTCTTTCCAATTTCAGCAAGATACAGACGAGCAAGCAAAATGCATGCACATGCAAGGGGAGTGCCAAAATGAGAATTTTGAGCACTCCCCTCACGTTGCTTGTCCTCTGAACTTGCACAATATGCACATTTTTTCTGCACTCTCTACTTGCAGTATAGGTTGTTACTAGATTTAAGAGGAACTATTGATTTTCTTTTAGTTCTGGAACTATTCTTTGCTTATTTTTGGTTGCTCTGGTAACATAAAAAGAGAGCTGCACGTAGGTTAAAATGGATTTCAGATTGAAATGCTTTCAAGCCATTTGTCCATTACCCCTTTCAACCTAGTACAGCCTGAGAATGCTGTTGTTGGTGATGTGCTGGTCCTCACAAAACCCCTGGGGACTCAAATTGCTGTTAATGCTCACCAATGGCTTGAGGATGCAAAGTGGTGGGACCGAATCAAAGATGTTACAACAGCTGAGGAAGTAGAAAAGGCTTATCAGGATGCAATGCATTCCATGGCAAGATTGAATCGCAATGCTGCTCGATTGATGCATAAATTCGATGCTCATGGCGCTACAGATGTGACAGGCTTTGGAATTCTTGGCCATGCAAGGAATTTAGCTGCTAATCAGAAGTCAGAAGTGTCTCTGGTTGTACACACTCTTCCCATTTTGGCAAACATGGTGAAGGTCTTTAAAGCCTGTGGAATAGATTTTAAGCTACTGGAAGGATTTTCAGCTGAAACATCAGGAGGTCTTCTGGTTTGTCTCTCTCGGGGCAATGCACAGAGCTTTTGTGATGAGCTTGAGGCCTTGGATGGACAACCAGCATGGATTGTAGGAGAAGTGGTGTCTGGCAATAGGGAAGCAAGAATAGAGACAGATGCAAAAATAATTGAAGTCTAGCAAGCTCAACAGACTAGTTGTGGAGAAAATGAACAATTTGCCCTGCTTTAAACCAAAAGGCTTGTAAATCCTTTGCTGATATTAATTTTTAGAAGAAACAATACATCACCAACAAGAGTGTTGATTCTCAGTTTCAATGGCAGCAAGGTTTGAGCAGCTTGTTGCTGTGTTACGGGAATGGGGGATGCTCATTTACTCAGCGATATTTTATGTGTTGTATTATGAAACTTTTCAGGGAAATAATCTTTTAACTTGGAAAGCTGATGTTTTTACACAAAAATATAAAGCTGTTTGGGCATTTAGCGTTGTTAAAGGGTGGTGTACTTGTAAAAAAAAATGTTACAGTGGTTTGCTTATCAAATATAATGTTACTTGGGCAGTGCTTCTTTCAAGTGTTACATTCACGCATTGTACAAAGTTGTTATTATTTTTGCGACCTTTTTTGATTGTAGTGATAACTCTTCTTGGTTCAGAATTAGGTGTTTTTTGAAGCAGGTTATTTTCATTCTTCTTAGTCTTCAATCTGGTATAGATGATATTTCAATCATGTGCTTAGAATCTACAGGGGAGGGAGTGGGGTGTACATTAATTTTATGAAACAAAGGGAAATAGGCGTTTGAGAACTGATCTTATTCTTCAAGGAATATTTTTGTTTGACCAACCTGACTGCTGTCTTCGTTTTCTTTCACTTATACAGCCCTTGTGACGTCACATTAAAATAATCTATTACCAGAAGGCAGGCGCAAAAGTCTGAACGGATCAACTTGGGTTAAGTCAAATCATGTCAATTTATTTGCAAAGATGGCGTAATTTTTACCTTCATTCTCTCCACGTTTATAAATCCTGCCAAGCTCGCAACCCTGTCCAAGCGGAACTGACACTATAAAACAAAGTGGCGAATTGCTGGCACGCAGAAACTAAGCAAGGCTTTCTAGATTTGGCCCGTTCCAACTTTAGTACCTGCCTcaaagcaactatccttacatgatgtgaaagcttcttgcaagcttttttctgattttccttttttttttcttttattattacttaaattgttattaccacattacatcacttaataaatatTtccttaaata

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O18373	Inactive selenide, water dikinase-like protein OS=Drosophila melanogaster OX=7227 GN=Sps1 PE=2 SV=1
Q99611	Selenide, water dikinase 2 OS=Homo sapiens OX=9606 GN=SEPHS2 PE=1 SV=3
A1YIZ1	Selenide, water dikinase 2 OS=Sus scrofa OX=9823 GN=SEPHS2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007768 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004536 all species →	Family	Selenophosphate synthetase	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10256 all species →	SELENIDE, WATER DIKINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004756 all species →	Molecular Function	selenide, water dikinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016260 all species →	Biological Process	selenocysteine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0212.g33.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.