Detailed information of amic_s0218.g17.t1 in Acropora microphthalma

Genomic Location: sc0000218_pilon:228720...238895
NR annotation: XP_029185555.1, twinfilin-1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5I082Twinfilin-1 OS=Xenopus tropicalis OX=8364 GN=twf1 PE=2 SV=1
Q5RJR2Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1
Q68F50Twinfilin-1 OS=Xenopus laevis OX=8355 GN=twf1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005134 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00241
all species →		Cofilin_ADFCofilin/tropomyosin-type actin-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002108
all species →		DomainActin-depolymerising factor homology domainInterproscan
IPR028458
all species →		FamilyTwinfilinInterproscan
IPR029006
all species →		Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13759
all species →		TWINFILINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0003785
all species →		Molecular Functionactin monomer bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0010591
all species →		Biological Processregulation of lamellipodium assemblyInterproscan
GO:0010976
all species →		Biological Processpositive regulation of neuron projection developmentInterproscan
GO:0030016
all species →		Cellular ComponentmyofibrilInterproscan
GO:0030042
all species →		Biological Processactin filament depolymerizationInterproscan
GO:0030837
all species →		Biological Processnegative regulation of actin filament polymerizationInterproscan
GO:0042989
all species →		Biological Processsequestering of actin monomersInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051016
all species →		Biological Processbarbed-end actin filament cappingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0218.g17.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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