Detailed information of amic_s0223.g5.t1 in Acropora microphthalma

Genomic Location: sc0000223_pilon:118456...121171
NR annotation: XP_015771792.1, PREDICTED: ankyrin repeat and SOCS box protein 13-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008979 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07525
all species →		SOCS_boxSOCS boxDomainInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR050842
all species →		FamilyCul2-RING E3 Ligase Substrate-Recognition Fem-1Interproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24173
all species →		ANKYRIN REPEAT CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0223.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP