Detailed information of amic_s0231.g3.t1 in Acropora microphthalma

Genomic Location: sc0000231_pilon:75076...85142
NR annotation: XP_015749150.1, PREDICTED: contactin-associated protein-like 2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O54991Contactin-associated protein 1 OS=Mus musculus OX=10090 GN=Cntnap1 PE=1 SV=2
P97846Contactin-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cntnap1 PE=1 SV=1
P19137Laminin subunit alpha-1 OS=Mus musculus OX=10090 GN=Lama1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000919 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210
all species →		Laminin_G_2Laminin G domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791
all species →		DomainLaminin G domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR050372
all species →		FamilyNeurexin-related cell adhesion and synaptic proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15036
all species →		PIKACHURIN-LIKE PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0231.g3.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0231.g3.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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