Gene detail

Detailed information of amic_s0236.g2.t1 in Acropora microphthalma

Genomic Location: sc0000236_pilon:47926...81201
NR annotation: CAH3168860.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0236.g2.t1

TTAAGTAGTGCATGTTAATGTAGTGTAAGTATCGTGTAAAATGTTATTAAGTACTGTATGGTAGAGTAAGTATTATGTGTCGTATTGCAGTAGCTGGAAATGACATCAGCACAGCAGATTTAGTGTTAGCTGCTGCCAAGATATGTGACAGTGTGCAAGTCTTGAAGGACAAAAAACCAGCATCCTTTCCCAGTTCGCACCAGTTTCCATACTGGGGTACTGTCCTCTATCAGTTGAAAACACGAATCCGAAATGTTAAAGGGTACCAGAAAAGAAAATCGACAAATGGGAAGTCTTGTCAAAAAGATACCACCGAACTTGGGGAAAAGGAAGTTGACGACCTACACGCAGAACTACTCAGAGAATTGAAAAGATCGAAAAAAAATTTTGCAGCTATTCATGAAATGCAGGAAAACACATTCGAGAAAAGAAAACATCAAATACAGCAACTAGCACATGACAAGTCTGACAAGAACATTGTTCAAGAGATAGTGATGAAATACCCTTTTTTTAAAGTCCATGATTGTGCTCTACTGAATGAGTTGGAACTGCACTTAGGAGATGGTGCCTCTTCAAGTATTGAGCAATTCAAAAGCAACTGGAAGAGCATATCATTGAAAGTTAAAACCTTCTTGGAGAGCCATAATGATTGTTTGCTTCCAGATGATCAAGAAACCACCCCTGATGACATTTGTGGAGTACTGTTAGAGCATGCACACACAGTTGTGGGTGACAAGGAATGCTCAATACCACTCATGAATATTTTTCCTCAGGGCAAGTCACCTGTGGCATCACTTGTTCAGAAGGGTACCAAAACAACACAACCAACCCTTTGGTGTTTGCAAGATGAGGGCCTCGCACAACAACAGTTCATAGTTGTTGATAAGGAAATTTTTCTTGAGCTTTCTTCAAACAGTTACATACATGGTCTTCTTGTTCTACTGGCTGTGTATTTTGCCTTTGATCTCAGCTATGATAAACGGCAAGAACCAATTCTCAGATTTTTTGAAGAATTTCTTTTGGGTATCCACCCAACCAAGAAAACTGTACGGTGTGGTGAAATTTTTCAGAAACGTCTAATTTCAGTAAAGAAGGCTGGTGTTATTCCCGTTGTCGTGTTTGACGGTTTGTCGTTGCCATCCAAAGCAGGCGAAAATGAGAGGAGACGAAGGGCTGAAGGAGATCAGAATGTTAAGCCTGCTCTTGTATTCAGAGGGAAAGGTAATGTGAGCTCTGCGGAGAAAGACAAGTATGATGAAAGAGTTGATGTCCTTTTTGAACAAAATGCAAGGATGGATGAAGAAGTAAACATGCAATGGTGTAGCAAAACACTTTCTTGTGGGGTTGGAAATAGTGAACAGGAGAAGTTAATTTTTGCAGACAATGTCCGTTTTCAACAATCTAAAGAGTTCCATGAAGCATGTCGGAACGAGATTAATGCTACTGTGAATATGGTGCCCAAGAACCACACCAATAAAATCCAGCCCATTGATGCAGGGTGTGGGTGGATGATGAAAGTTAAAATTTCTACTGCAATGGACAGATGGCTAGAGACAGAGGACAACCTTGATAAATGGCATGACCAACTTTCAGGTAAGGACAGGCGGATTTTAATGACTCAGTGGACTGGGGAAGTATGGAGTGATCTTAAAGAAAACAAAGGGTTTCTCAAGAGGCCCATGATATGGAACAAGCTCAGGCTGGTCATCATCACAAGGATTATCACCAATATCATCATTGAGTTTGACAGAAATGTTGTGCAAGACTGCACAAGCACCAATAAGAGTGCACACCTTTTCAGGTTTCATGCAGCACTCAGATTAAAGTAATTGGAAGCGCTGTTTCCACCGACCAAAGTTTTGTTCAGTGGCCACTGTAGTCTTGCAGTGGGCCTTGTTAAATGCCTCCTCTTTTGCATTTGCAGTATTTGGATACCGTGTCATTAGAAATGGCTTGCACGGATAACTACTGTCACCCAATAGATACCCATCTTCAAATGCATGGTTGCTTTCAAGCCTTTCGTGTATCAATGAATTTGTGAAAACAAAACTGTCCTGTGTAGAGCCAGGCCACTTGGCAACCACACTGGTGAAGAGACCTCGAGTTAAATATAACAGAATGCAAATTAAAAATGAAATATTTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20908	GBP6; guanylate-binding protein 6	-	Signaling proteins	-	deepkoala