Detailed information of amic_s0241.g12.t3 in Acropora microphthalma

Genomic Location: sc0000241_pilon:321378...343435
NR annotation: XP_044173189.1, SEC14 domain and spectrin repeat-containing protein 1-B-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M7P4SEC14 domain and spectrin repeat-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=sestd1 PE=2 SV=1
Q80UK0SEC14 domain and spectrin repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Sestd1 PE=1 SV=1
Q6GNM9SEC14 domain and spectrin repeat-containing protein 1-B OS=Xenopus laevis OX=8355 GN=sestd1-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001183 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan
PF13716
all species →		CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036865
all species →		Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan
IPR001251
all species →		DomainCRAL-TRIO lipid binding domainInterproscan
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46607
all species →		SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005546
all species →		Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0010314
all species →		Molecular Functionphosphatidylinositol-5-phosphate bindingInterproscan
GO:0032266
all species →		Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0043325
all species →		Molecular Functionphosphatidylinositol-3,4-bisphosphate bindingInterproscan
GO:0070273
all species →		Molecular Functionphosphatidylinositol-4-phosphate bindingInterproscan
GO:0080025
all species →		Molecular Functionphosphatidylinositol-3,5-bisphosphate bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0241.g12.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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