Detailed information of amic_s0243.g2.t2 in Acropora microphthalma

Genomic Location: sc0000243_pilon:25144...43305
NR annotation: XP_015776805.1, PREDICTED: DNA ligase 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008365 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0243.g2.t2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR043443
all species →		FamilyFYN-binding protein 1/2-likeInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16830
all species →		SH2 CONTAINING ADAPTOR PRAM-1 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007229
all species →		Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0050852
all species →		Biological ProcessT cell receptor signaling pathwayInterproscan
GO:0072659
all species →		Biological Processprotein localization to plasma membraneInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0243.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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