Gene detail

Detailed information of amic_s0244.g5.t2 in Acropora microphthalma

Genomic Location: sc0000244_pilon:73306...85579
NR annotation: XP_029201869.2, palmitoyltransferase ZDHHC3-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0244.g5.t2

CTTGATTGAATAAACAAATATCTATTTTTGTCATTCATACTCTTGCCATGATTGGTTAAAATTCAGTCGTGAACGCGATACATTTCACGCCCAGTCACTGGTCACCGTACAGAAATCGACAAACATGGCGCTGTCGACGAGATCATTTTCTCTTGTGTTTATGTTAAGTTGCTTCGTGGTTGTCAGTGGACGCACTGGCAAGGAAAATGAGCGCTGTGGTGACCAGAAGTTTTACTGTCCGACGAAACAGCAATGTTTCGATCGGAATCTGAGATGTACCGGATCAAACGTCTGCGTTGATTCCAGCGGCAATGAAGCAAACTGTTTTGAAAGTAGTACTCGTGGTATGTACAACTACTTCAAGAAAACGTCTCCATTGTCGTCAAGTGGAAGCTCCTCTAAAAAGAAACGATCACTAGATCCAACTCACTGGTTCGTAGAATACCGTGGCTTTGTTTATGAGTTTGGGAATTCATACGGTAGTCATGAACTTGATGTGAACGATCCCAACTATAAATATGGCCCAGGACGAGAAAAGGTTCTTTCCACAAAGTTGGTTGGAAGCAGCCGCTGTACTAGGGATCAAGTTAACAGCTTCGTTAAAAAGTGGCTTGAAGCAAATCCCAATTATAATTTGCTTACAAACAACTGTCAGCACTTTGTTAAACGACTACTGGAAGAACTTGGAAGGAACTGTTCTAACAGAGGTAGAAGGGAAGTAGAAGTCACCGAAAGTTTGAAGGCTCCCAGCGTGGTAGCTCGACCCTCAACAAGTCTAGATTTCTCAGAAATAAATAAAGCAAAGACCAAACAGATTCAGGATGAAAATGAATGGACAATTTGTGCCAAGTGTGAAGCATATCGTCCTCCAAGGGCACATCACTGTCGAACATGTGGAAGATGTGTAAGAAAGATGGATCATCATTGTCCTTGGATCAACAACTGTGTTGGTGAGGCCAATCAGAAGTACTTTGTTTTATTTTTATTTTACACAGGTCTTGCATCATTGTACTGTATCATCCTCACTGCTGTATCATGGACATTGAATTGCCAGGGCTGCACGATAGAGTATGCAAAAAAGACACGGATAATTTACACTATTATCCTCATGATAGAGGGCTGCCTGTTTGGTTTGTTTGTGCTTGCTATGTTATGTGATCAGTTTTCAGCCATAATGGATGATATGACTGCAGTTGAACACGTACAAAGACACATTAGAACAAATCGTAAACCTAGAACTGCTCTCCTGACTGAAGTGTTTGGAAGAGGAACATTCTTCTTGTGGTTTTGTCCTTGCTCCACTCCACACAGTGCAGCAATGCCTTCAGAACGCTATAATGTCTAGTATGGACAGGCAAACTATCCACTTAAAACATTGGAAGGATATGTACAATAATTTTTATTACATGCAACATAAAAAACAAGTTTTTGTTCTCTGCAGTATTGTAACATGATCCGTCAAGGTTTATAGGGACCCTTTCAGCTTCAAGCATTTTAGTCATAGGTACCCATTATTTATTGTGAGAGCAGAGGCATAACTGAGGTGCCGACATGTGGCCATGCTTTTATTCTTAGAAAATCTCTTCAGTAAATGTTGTGTTAATTTGGCCCTAAAACTTTAATAAATAATTTAAGATCTGTTATGCTAGTTTTTGGAAATTCTTTATAATTATCCAAGTTAAAAAGAAAGATCATTTGTAGGTTCCCATTTTGATTTACAACCAACTTATTAAGATAAAGAAAATATTGTTTTGTATTTACCAGCTAAATTTGAAAGATTAGTTTAAATCAAGTCCTATCCATCAAAGAAAGCTACACAGATTTTATTTCAACCATAAGACTTAATTTTGTGCTCTGTTATGGAAGACATGTATTAAAAGAAGTGTTTGTAGCTTTCAAAGCAACTATCATTCTTGGGTAGAAAACAAATAGTGGCATTAAAACACTGAAAGTACAGTATCTTTTTTATCAAGCACAAATTGCCAAATAGAACAGATGCTGCCCAGGTTTTCATGTATTTGACAAGACAAGGAAGGCCTTTATCCATATGACCCAAATTTGAATTTTCTTTAGCTTATATAGAAAATTTAGTAGGAAGGATTATGGCCCTTTACTCTGCTCGGAGACCAAGGTTTTCTCTTCCTGCCTAAAATCAATCTTTGTCAATAGCTAGATACAAAGAATAAAGTATTTTGTTTCAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NYG2	Palmitoyltransferase ZDHHC3 OS=Homo sapiens OX=9606 GN=ZDHHC3 PE=1 SV=2
Q8R173	Palmitoyltransferase ZDHHC3 OS=Mus musculus OX=10090 GN=Zdhhc3 PE=1 SV=1
Q2TGK3	Palmitoyltransferase ZDHHC3 OS=Rattus norvegicus OX=10116 GN=Zdhhc3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012504 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01529 all species →	DHHC	DHHC palmitoyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001594 all species →	Domain	Palmitoyltransferase, DHHC domain	Interproscan
IPR042266 all species →	Homologous_superfamily	PPPDE peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22883 all species →	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006612 all species →	Biological Process	protein targeting to membrane	Interproscan
GO:0018230 all species →	Biological Process	peptidyl-L-cysteine S-palmitoylation	Interproscan
GO:0019706 all species →	Molecular Function	protein-cysteine S-palmitoyltransferase activity	Interproscan
GO:0016409 all species →	Molecular Function	palmitoyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0244.g5.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.