Detailed information of amic_s0244.g7.t2 in Acropora microphthalma

Genomic Location: sc0000244_pilon:85691...116075
NR annotation: XP_029201863.2, ankyrin repeat domain-containing protein 17-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004482 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13606
all species →
Ank_3Ankyrin repeatRepeatInterproscan
PF00536
all species →
SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00013
all species →
KH_1KH domainDomainInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →
AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036612
all species →
Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001660
all species →
DomainSterile alpha motif domainInterproscan
IPR004088
all species →
DomainK Homology domain, type 1Interproscan
IPR004087
all species →
DomainK Homology domainInterproscan
IPR051631
all species →
FamilyAnkyrin repeat and KH/SAM domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23206
all species →
MASK PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16726ANKRD17, MASK; ankyrin repeat domain-containing protein 17-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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