Gene detail

Detailed information of amic_s0249.g1.t2 in Acropora microphthalma

Genomic Location: sc0000249_pilon:807...16565
NR annotation: XP_015761632.1, PREDICTED: nucleolar protein 58-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2X3	Nucleolar protein 58 OS=Homo sapiens OX=9606 GN=NOP58 PE=1 SV=1
Q4R779	Nucleolar protein 58 OS=Macaca fascicularis OX=9541 GN=NOP58 PE=2 SV=1
Q9QZ86	Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08156 all species →	NOP5NT	NOP5NT (NUC127) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012974 all species →	Domain	Nucleolar protein 58/56, N-terminal	Interproscan
IPR045056 all species →	Family	Nucleolar protein Nop56/Nop58	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10894 all species →	NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030515 all species →	Molecular Function	snoRNA binding	Interproscan
GO:0031428 all species →	Cellular Component	box C/D methylation guide snoRNP complex	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0249.g1.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.