Gene detail

Detailed information of amic_s0250.g3.t1 in Acropora microphthalma

Genomic Location: sc0000250_pilon:26806...33925
NR annotation: XP_044167512.1, pantothenate kinase 3-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0250.g3.t1

GGATTTTGGAGATCAGGGGAAAACCATTTAGGGTTGTTTTCACAAGGAATTGATCGGGGACTTTTGCCATGATTGTGTAATTAATACAAGCCTTATATTCTCCATAAGTGGCAAGTTTTTATTTATTGACCGAAACACTCGCGATCGTCGAACTTTGGCCATTTTGACACTTGTTTTATATAACTTTGTGACGTGATGTGCATGCACGGAACGTGAGCGTGCCCGTTTCGGTAAATTAACCAAGAAGCCGCGTGCTTGCCATCAGAATAGAAGCAAGCAAACAAAGTCAAGATCTGAGATGAATAACAAAGCACGGCTTCCCTGGTTTGGACTTGACATTGGAGGAAGTTTAGTCAAACTGGTTTATTTTGAGCCATGCAGTTCACAACTTAACTGTAAAGGACAAGAAAAAGTCGGCTTAGAGGCTATACAAGACTTTATCAAGTCAAACATTCATTATGGTGAAGAAGGAAGAAGAGATGAGAATTTAGCTATGGAGCATGTGATGTTAGGAAACAGAGAGGGGCATCTTCACTTTATAAGGTTTCCAACAGATGCTGTTGATACTTTTCTGATAGTTGCCAAAGAGATGAATGCTTCAGTTCTCAATAATAAAGTTTGTGCAACGGGTGGAGGAGCATTCAAGTTTGAGAAAGACTTCAGAGAGGTTCTTGGAGTTCAGCTTCTGAAATATGATGAACTAGAATGTCTTGTTCATGGCATCCACTTTATTAATGCACATGGAGTGGATGAATGCTTTTACTGGAACAATCTGCACTGTTTAGAAAAATCTGTCAAGGTTTCGTATGACTTTCACAATGATGCTTATCCTTACATTGTCGTAAACATTGGATCTGGAGTCAGTATTCTTTTAGTTGAATCTGGCGAAAAATTCTCAAGAATAAGTGGAACCAGTCTTGGAGGGGGCACATTTCTTGGTCTTTGTTGTTTGTTGACGAATTGTGCATCATTTGAAGAAGCTCTTTCCATGGCTGAGGAGGGTGACAGCACCAAGGTTGACAAACTTGTGCGTGATATATATGGAGGAGACTACACCAAGTTTGGTTTACCAGGAGATTCAATAGCAAGCAGTTTTGGGAAGATGACTTCTGAGGAAAATCGATCATCAGTCAGTGATAAAGATTTAGCCAGAGCCATGTTGGTGACCATAACAAACAACATTGGCTCCATTGCACGAATGTGTGCTGTCAATCATAAAGTAGAGCGTGTGGTATTTGTGGGAAATTTCCTCCGTGGTAATACAATAGCCATGAAGCTGCTTGCTTTTGCAATGGATTATTGGTCTAAAGGAACAATGAAGGCTCTCTTTCTTAAACATGAGGGCTATTTTGGTGCAAGTGGGGCCTTATTAGAACTTATGACAAGAATGAATGAGAATGGTGAATCGACCGATTGACAGATGCACATGTAGTCAATGATGAAATTTAGTCTGATAATTTTTTCAATTTTGCATAACAATACCAAACAGTCGAATGTAATATACAGGGCTTCCGGAATTATGTGCCAATGGGAAATCGCATAATTCGGATCTGAGCACACAATTCTGGaaaaaaaaatgcataatagcgcataattttctaaattatttaaggcatcttcttataagatttgtttttttcaaaccatgaaagatggatggaaatttttttcccgtaaatattttcacagcaaacagcccccgcttcattgtgaatagtgtgtacaaaggcattccgggtgtttagccgttcgggcctatgctctaccctttttctatagaacatgtgccatgattagaagaaataattataacaaatcacagcttgaaaaagaaaagagccccctgctttgatgtaatgtattttggtggcaaaaccactttcacttgcAAAATGGATAATTAATTGAAACATTTTCACTAAAAGGTATTGTGCAATTCGCATAATTCAGGGGTTTTGGTGCAAAATTTGGCAAAAACAACGCATAATATGCTTTTTAAAAAATGCATAATTCCGGAGCCCTGAATATAAGACTTTAAAATAATAAGCATTTGACAACGAAGAATTCATTTTGTATACCGCAATCATACTTGTAAATTATTGGGAATTCACTGAAATAGGGTTTAAGAAATTTATGTAAACTGTAATGAAACCAAACCTTTTTATAAGGCTTTTGTAATTTACATTGAGGAAATATTTTCATTTTTTAAATTTTACACAACTAAAATGGTGGAAGCAATGTTGACGTGGATGCTTACCATTGGCTTGTGTAAAGAATTTTCCTATAAGTGCTGGGGTGCAATATTTTAACAATCAGATATATAAATTGGATTATTATGagcggccatctaaccacattttaatatgatttattattagccatgttttcaataaattagctcaaacaag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08DA5	Pantothenate kinase 3 OS=Bos taurus OX=9913 GN=PANK3 PE=2 SV=1
Q9H999	Pantothenate kinase 3 OS=Homo sapiens OX=9606 GN=PANK3 PE=1 SV=1
Q8R2W9	Pantothenate kinase 3 OS=Mus musculus OX=10090 GN=Pank3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001784 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03630 all species →	Fumble	Fumble	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR004567 all species →	Family	Type II pantothenate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12280 all species →	PANTOTHENATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004594 all species →	Molecular Function	pantothenate kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0015937 all species →	Biological Process	coenzyme A biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09680	PANK1_2_3, CAB1, coaW; type II pantothenate kinase	EC:2.7.1.33	Pantothenate and CoA biosynthesis	ko00770	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.