Genomic Location: sc0000250_pilon:507745...526919
NR annotation: XP_029198038.1, PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X2 [Acropora millepora]
| CDS | |||||
| amic_s0250.g39.t1 | |||||
| Transcript |
| amic_s0250.g39.t1 |
| Protein |
| amic_s0250.g39.t1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q5F450 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1 | ||||
| Q8BGF7 | PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Mus musculus OX=10090 GN=Pan2 PE=1 SV=1 | ||||
| Q504Q3 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|USP|USP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00929 | RNase_T | Exonuclease | Family | Interproscan |
| PF13423 | UCH_1 | Ubiquitin carboxyl-terminal hydrolase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013520 | Domain | Exonuclease, RNase T/DNA polymerase III | Interproscan |
| IPR028881 | Domain | PAN2, UCH domain | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR050785 | Family | PAN2-PAN3 complex catalytic subunit | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15728 | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0004535 | Molecular Function | poly(A)-specific ribonuclease activity | Interproscan |
| GO:0031251 | Cellular Component | PAN complex | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12571 | PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 | EC:3.1.13.4 | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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