Detailed information of amic_s0250.g42.t2 in Acropora microphthalma

Genomic Location: sc0000250_pilon:542510...597941
NR annotation: XP_044176105.1, centromere protein F-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SWS9Janus kinase and microtubule-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Jakmip1 PE=1 SV=1
Q5DTN8Janus kinase and microtubule-interacting protein 3 OS=Mus musculus OX=10090 GN=Jakmip3 PE=1 SV=2
Q96N16Janus kinase and microtubule-interacting protein 1 OS=Homo sapiens OX=9606 GN=JAKMIP1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001603 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653
all species →		SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR040325
all species →		FamilyRIMS-binding protein 1/2/3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14234
all species →		RIM BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007274
all species →		Biological Processneuromuscular synaptic transmissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0250.g42.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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