Detailed information of amic_s0254.g10.t2 in Acropora microphthalma

Genomic Location: sc0000254_pilon:111427...126545
NR annotation: XP_029196202.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114961605 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14780Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3
P50282Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1
P41245Matrix metalloproteinase-9 OS=Mus musculus OX=10090 GN=Mmp9 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000978 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR051666
all species →		FamilySeminal Plasma Capacitation RegulatorInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR017896
all species →		Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR036195
all species →		Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22918
all species →		SEMINAL PLASMA PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008201
all species →		Molecular Functionheparin bindingInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0048240
all species →		Biological Processsperm capacitationInterproscan
GO:0046373
all species →		Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556
all species →		Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0254.g10.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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