Detailed information of amic_s0255.g13.t1 in Acropora microphthalma

Genomic Location: sc0000255_pilon:240936...251816
NR annotation: XP_015766551.1, PREDICTED: neuronal pentraxin-1-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P47972Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2
O70340Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
P97738Neuronal pentraxin-2 OS=Rattus norvegicus OX=10116 GN=Nptx2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000100 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR051360
all species →		FamilyNeuronal Pentraxin and RelatedInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR030476
all species →		Conserved_sitePentaxin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277
all species →		PENTRAXINInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for amic_s0255.g13.t1 in Acropora microphthalma.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0255.g13.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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