Gene detail

Detailed information of amic_s0263.g12.t1 in Acropora microphthalma

Genomic Location: sc0000263_pilon:180646...184130
NR annotation: XP_015762992.1, PREDICTED: charged multivesicular body protein 3-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q58CS7	Charged multivesicular body protein 3 OS=Bos taurus OX=9913 GN=CHMP3 PE=2 SV=4
Q4R574	Charged multivesicular body protein 3 OS=Macaca fascicularis OX=9541 GN=CHMP3 PE=2 SV=3
Q5RAU5	Charged multivesicular body protein 3 OS=Pongo abelii OX=9601 GN=CHMP3 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007242 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03357 all species →	Snf7	Snf7	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005024 all species →	Family	Snf7 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10476 all species →	CHARGED MULTIVESICULAR BODY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000815 all species →	Cellular Component	ESCRT III complex	Interproscan
GO:0005771 all species →	Cellular Component	multivesicular body	Interproscan
GO:0007034 all species →	Biological Process	vacuolar transport	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0032509 all species →	Biological Process	endosome transport via multivesicular body sorting pathway	Interproscan
GO:0045324 all species →	Biological Process	late endosome to vacuole transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12193	VPS24, CHMP3; charged multivesicular body protein 3	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.